人类iPSC中的X染色体不活化为自体体中X调节的基因表达提供了洞察力
Hande Topa1, Clara Benoit-Pilven2, Taru Tukiainen2
1Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland.
Genome biology
|June 1, 2024
概括
人类诱导的女性多能干细胞 (hiPSCs) 中的X染色体失活 (XCI) 侵蚀变化,影响基因剂量和性别偏差的基因表达. 这种侵蚀可以影响自身基因调节,并可能影响疾病基因表达.
科学领域:
- 遗传学 遗传学 是一个
- 干细胞生物学 干细胞生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 人类诱导的多能干细胞 (hiPSCs) 中的X染色体失活 (XCI) 变异性影响了生物学性别偏差的建模.
- 在雌性hiPSC中,基因智能的X染色体基因剂量格局尚未完全理解.
- 描述XCI模式对于准确的生物建模至关重要.
研究的目的:
- 系统地调查雌性hiPSCs的等位基因特异性表达.
- 描述基因去抑制和逃离XCI的模式.
- 了解XCI侵蚀对基因剂量和性别差异的影响.
主要方法:
- 在165个雌性hiPSC系中对等基因特异性表达的分析.
- 对X染色体基因剂量的系统调查.
- 鉴定基因集群和XCI侵蚀的阶段.
主要成果:
- XCI 侵蚀是非随机的,影响了组织中 XCI 逃脱的基因.
- 根据XCI阶段确定了三种不同的雌性hiPSC线条集群.
- 侵蚀放大了女性偏见的表达,并改变了X链和自体基因的性别差异,潜在地弥补了疾病基因的功能丧失.
结论:
- 建立了一个全面的X染色体基因剂量在hiPSCs的视图.
- 在 XCI 侵蚀直接调节转基因体内自体基因表达.
- 女性hiPSCs的可变XCI重新激活提供了对人类基因调节中的性别差异的见解.
关键词:
与XIST结合的自体基因一个等位基因的特定表达.在RNA-seqqq.性差异性差异性差异性差异性差异性差异性差异性一个X染色体不活化.在X染色体调节的基因表达中,X染色体调节的基因表达这是 hiPSC.更多相关视频
08:27A Non-random Mouse Model for Pharmacological Reactivation of Mecp2 on the Inactive X Chromosome
Published on: May 22, 2019
6.4K
12:42Quick Fluorescent In Situ Hybridization Protocol for Xist RNA Combined with Immunofluorescence of Histone Modification in X-chromosome Inactivation
Published on: November 26, 2014
14.0K
相关概念视频
Inheritance of Chromatin Structures
6.2K
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying...
6.2K
X-Inactivation
38.4K
The human X chromosome contains over ten times the number of genes as in the Y chromosome. Since males have only one X chromosome, and females have two, one might expect females to produce twice as many of the proteins, with undesirable results.
38.4K
Chromatin Modification in iPS Cells
1.6K
Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
1.6K
Epigenetic Regulation
31.0K
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
31.0K
Somatic to iPS Cell Reprogramming
2.2K
Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012...
2.2K
The Ratio of X Chromosome to Autosomes
8.5K
In most organisms, sex is determined by the ratio of X and Y chromosomes. However, in some organisms, such as Drosophila and C.elegans, sex is determined by the ratio of the number of X chromosomes to the number of sets of autosomes. The Y chromosome in Drosophila is active but does not determine sex. It contains genes responsible for the production of sperms in adult flies.
Normal male Drosophila has a ratio of one X chromosome to two sets of autosomes. In contrast, normal female...
Normal male Drosophila has a ratio of one X chromosome to two sets of autosomes. In contrast, normal female...
8.5K
