斯特里戈拉克顿诱导基因表达的D14依赖的大规模变化,需要SWI/SNF染色体重塑剂
Jazmine L Humphreys1,2, Christine A Beveridge1,2, Miloš Tanurdžić1
1School of Biological Sciences, The University of Queensland, St Lucia, Queensland, 4072, Australia.
The Plant journal : for cell and molecular biology
|June 11, 2024
概括
斯特里戈拉克顿通过改变色素可访问性来快速调节植物基因表达. 这个过程需要SWI/SNF ATPase SPLAYED,揭示了一个新的激素信号控制层.
科学领域:
- 植物生物学 植物生物学
- 分子遗传学 分子遗传学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 斯特里戈拉克顿 (SL) 是关键的植物激素,通过基因表达调节发育.
- 早期对SL的基因表达反应尚不清楚.
研究的目的:
- 调查SL.S.立即早期基因调节的情况.
- 探索染色体重塑在SL信号传递中的作用.
主要方法:
- 用合成SL (rac-GR24) 处理原生质.
- RNA测序 (RNA-seq) 用于分析随时间 (5-180分钟) 的基因表达.
- 使用测序 (ATAC-seq) 测定转化酶可访问的染色质,以绘制染色质可访问性的地图.
主要成果:
- 在对rac-GR24的反应中发现了快速,动态和D14依赖的基因表达变化.
- 确定SL信号对染色体重塑的显著依赖性,需要SWI/SNF ATPase SPLAYED (SYD).
- ATAC-seq揭示了1400多个不同可访问的区域,这些区域在转录变化之前,需要SYD.
结论:
- SL信号涉及到快速调节染色质可访问性.
- SWI/SNF ATPase SYD对于SL诱导的染色质修饰和基因表达是必不可少的.
- 确定了SL cis调节元素的潜在基因组位置.
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