自由氨酸残留对血清突变对细胞德克斯林酸化酶的影响
Tomohiro Kuga1, Naoki Sunagawa1, Kiyohiko Igarashi1
11 Department of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo.
Journal of applied glycoscience
|June 12, 2024
概括
来自无氧细菌的纤维素酸化酶 (CDP) 对纤维素代谢至关重要. 在CDP中突变自由氨酸残留物增强了其氧化稳定性,改善了其在有氧环境中的使用.
科学领域:
- 生物化学 生物化学
- 酶学 是一种酶学.
- 蛋白质工程是指蛋白质的工程.
背景情况:
- 纤维素酸化酶 (CDP) 促进无氧细菌中高能效的纤维素分解.
- 由于CDP的可逆反应,可以在体外生产纤维素材料,但氧化敏感性限制了有氧应用.
- 假设CDP中的自由氨酸残留物会导致氧化失活.
研究的目的:
- 调查自由氨酸残留在CDP氧化不稳定性中的作用.
- 为改进体外应用设计一种更加氧化稳定的CDP变体.
主要方法:
- 用局部导向的突变发生来用血清取代所有11个自由的氨酸残留物,从而产生了CDP-CS变体.
- 进行了酶活性测定,以比较CDP-CS与野生类型的CDP.
- 采用X射线晶体学和集体精细化来分析结构变化.
主要成果:
- 该CDP-CS变体表现出与野生类型酶相似的酶活性.
- 在长期储存期间,CDP-CS显著增加了对氧化的稳定性.
- 结构分析显示,特定突变 (C372S,C625S) 减少了蛋白质主链的波动,有助于增强稳定性.
结论:
- 用胺替换自由的氨酸残留物有效地提高了CDP的氧化稳定性,而不会影响其活性.
- 工程 CDP-CS 变体显示出在有氧环境中扩展体外应用的前景.
- 减少CDP-CS中的蛋白质结构波动与其改善的抗氧化能力有关.
相关概念视频
Phosphorylation
50.3K
The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
50.3K
Allosteric Proteins-ATCase
5.7K
Binding sites linkages can regulate a protein's function. For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
5.7K
Protein Kinases and Phosphatases
13.1K
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
13.1K
Protein Modifications in the RER
5.1K
Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal...
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal...
5.1K


