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相关概念视频

Homologous Recombination02:31

Homologous Recombination

50.4K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.4K
Lagging Strand Synthesis01:59

Lagging Strand Synthesis

51.1K
During replication, the complementary strands in double-stranded DNA are synthesized at different rates. Replication first begins on the leading strand. Replication starts later, occurs more slowly, and proceeds discontinuously on the lagging strand.
There are several major differences between synthesis of the leading strand and synthesis of the lagging strand. 1) Leading strand synthesis happens in the direction of replication fork opening, whereas lagging strand synthesis happens in the...
51.1K
DNA Helicases00:55

DNA Helicases

21.3K
DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
21.3K
DNA Topoisomerases02:02

DNA Topoisomerases

31.2K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
31.2K
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
6.0K
DNA as a Genetic Template02:05

DNA as a Genetic Template

21.9K
Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...
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相关实验视频

Updated: Jun 24, 2025

Studying DNA Looping by Single-Molecule FRET
11:27

Studying DNA Looping by Single-Molecule FRET

Published on: June 28, 2014

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循环是DNA整合的几何催化剂.

Cleis Battaglia1, Davide Michieletto1,2

  • 1School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK.

Nucleic acids research
|June 12, 2024
PubMed
概括

DNA整合不是随机的. DNA中的循环作为催化剂,指导DNA元素插入的地方,并影响基因组进化和工程.

科学领域:

  • 基因组学就是基因组学.
  • 分子生物学分子生物学
  • 生物物理学的生物物理.

背景情况:

  • 不规范的DNA插入有助于遗传多样性和疾病.
  • 选择DNA整合部位的机制尚未完全理解.
  • 像病毒DNA和转子体这样的DNA元素集成到基因组中.

研究的目的:

  • 研究DNA元素集成的物理机制.
  • 探索DNA循环在集成地点选择中的作用.
  • 了解DNA构造如何影响整合模式.

主要方法:

  • 使用了分子动力学 (MD) 模拟.
  • 模拟研究了DNA插入裸体DNA和染色质基板中的DNA.
  • 分析了DNA循环和核体对整合的影响.

主要成果:

  • 通过降低基底变形的能量屏障,DNA循环作为DNA整合的"几何催化剂"起作用.
  • DNA循环的1D和3D结构显著影响了整合部位的分布.
  • DNA循环与核细胞相竞争,以吸引DNA的整合.

结论:

更多相关视频

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
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Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules

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Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles
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Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

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相关实验视频

Last Updated: Jun 24, 2025

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Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
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Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules

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Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles
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Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

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  • DNA循环在指导DNA整合中起着至关重要的作用.
  • 了解这些机制可以为基因组进化和工程策略提供信息.
  • 这些模拟结果的实验验证是可行的.