用SubseqHash2对容易出错的序列进行高效的播种

Xiang Li1, Ke Chen1, Mingfu Shao1,2

  • 1Department of Computer Science and Engineering, The Pennsylvania State University, United States.

概括

SubseqHash2显著加快了长读序列的基于次序的播种,比传统方法 (如读取映射和序列对齐中的应用) 提高了比kmers更准确和更快的速度.

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