关于食物传播疾病的基因组观点
David J Lipman1, Joshua L Cherry2,3, Errol Strain1
1Center for Food Safety and Applied Nutrition, Office of Regulatory Science, College Park, MD, USA.
medRxiv : the preprint server for health sciences
|June 21, 2024
概括
全基因组测序揭示了食物传播病原体集群,显示年轻年龄组更容易受到沙门氏菌,大肠杆菌和坎比洛巴克菌感染. 许多污染事件是长期的,并且与广泛的商业食品分销有关.
科学领域:
- 微生物学与公共卫生
- 基因组学和传染病流行病学
背景情况:
- 全基因组测序 (WGS) 对公共卫生至关重要,以追踪食物传播疾病的爆发到其源头.
- 零星的食物中毒病例很常见,但往往太小,不需要详细的调查.
- 了解病原体进化和传播的动态是预防食物传播疾病的关键.
研究的目的:
- 为了分析细菌病原体基因组的集群 (沙门氏菌,大肠杆菌,菌,李斯特菌) 以最小的突变.
- 为了获得有关食品污染事件的性质和持续时间的新见解.
- 调查与年龄相关的易感性和病原体患病率的地理差异.
主要方法:
- 从四种关键细菌病原体的临床分离物中分析全基因组序列.
- 对以少量突变差异的分离物进行聚类分析,以确定传播链.
- 检查已识别集群的年龄分布,地理分布和时间持久性.
主要成果:
- 年龄较小的年龄组对沙门氏菌,大肠杆菌和坎比洛巴克菌感染的易感性增加.
- 在美国各地观察到沙门氏菌血清菌的频率存在显著的区域差异.
- 很大一部分污染事件,特别是沙门氏菌,是长期的 (长达三年).
结论:
- 基于WGS的集群分析提供了对食品传播污染事件的更深入的了解.
- 食物传播的病原体经常导致与商业分布的食品相关的多州疫情.
- 六个月以下婴儿的沙门氏菌感染通常是由于交叉污染而不是初级配方奶粉污染.
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