通过激进的SAM-RiPP酶来访问和探索这种不寻常的化学成分
Qianqian Guo1, Brandon I Morinaka1
1Department of Pharmacy and Pharmaceutical Sciences, Faculty of Science, National University of Singapore, Singapore.
Current opinion in chemical biology
|June 25, 2024
概括
激进的SAM酶合成具有抗菌潜力的独特. 基因组挖掘有效地揭示了这些复杂的酶变化,用于药物发现.
科学领域:
- 生物化学和分子生物学
- 自然产品化学 自然产品化学
- 酶学 是一种酶学.
背景情况:
- 激进的SAM酶催化了生物合成中的复杂修饰.
- 这些改性具有显著的抗微生物活性,具有作为下一代治疗药物的潜力.
- 基因组挖掘是发现新型酶途径和产品的强大策略.
研究的目的:
- 突出发现激进SAM酶催化转换的策略.
- 讨论基因组挖掘在发现激进SAM依赖路径中的应用.
- 审查激进SAM酶的生物合成成分和新兴发现方法.
主要方法:
- 基因组挖掘使用酶第一方法来识别激进的SAM酶.
- 最少基质和相关修饰酶的表达,以显示转化.
- 生物信息分析用于识别和表征未表征的激进SAM蛋白质.
主要成果:
- 通过激进SAM酶活性识别独特的基架和构成块.
- 证明基因组挖掘可以揭示复杂的酶变化,优于晚期化学合成.
- 对于激进SAM酶的一般生物合成成分的表征.
结论:
- 激进的SAM酶是新型抗菌化合物的丰富来源.
- 基因组挖掘是一种有效的策略,用于发现新的根性SAM-依赖的途径和酶.
- 新兴的方法将进一步扩大这些多功能酶的发现和研究.
更多相关视频
相关概念视频
Radical Reactivity: Overview
2.1K
Radicals, the highly reactive species, gain stability by undergoing three different reactions. The first reaction involves a radical-radical coupling, in which a radical combines with another radical, forming a spin‐paired molecule. The second reaction is between a radical and a spin‐paired molecule, generating a new radical and a new spin‐paired molecule. The third reaction is radical decomposition in a unimolecular reaction, forming a new radical and a spin‐paired...
2.1K
Radical Reactivity: Electrophilic Radicals
1.9K
Radicals adjacent to electron‐withdrawing groups are called electrophilic radicals. These radicals readily react with nucleophilic alkenes. For example, the malonate radical, in which the radical center is flanked by two electron‐withdrawing groups, reacts readily with butyl vinyl ether, which consists of an electron‐donating oxygen substituent. The reaction between electrophilic malonate radical and nucleophilic vinyl ether is favored because the radical has a...
1.9K
Radical Reactivity: Nucleophilic Radicals
2.1K
Radicals adjacent to electron-donating groups are called nucleophilic radicals. These radicals readily react with electrophilic alkenes. The SOMO–LUMO interactions are the driving force for the reaction, where the high-energy SOMO of the electron-rich, nucleophilic radicals interacts with the low-energy LUMO of the electron-deficient, electrophilic alkenes. Such SOMO–LUMO interactions are the basis of reactive radical traps, affecting the selectivity in radical reactions. For...
2.1K
Radical Reactivity: Steric Effects
1.9K
The presence of electron-donating, electron-withdrawing, or conjugating groups adjacent to a radical center, imparts electronic stabilization to the radicals. Examples of such electronically-stabilized radicals are triphenylmethyl, tetramethylpiperidine‐N‐oxide, and 2,2‐diphenyl‐1‐picrylhydrazyl. These radicals are remarkably stable and are known as persistent radicals. Some of the persistent radicals can even be isolated and purified.
Along with electronic...
Along with electronic...
1.9K
Radical Formation: Overview
2.1K
A bond can be broken either by heterolytic bond cleavage to form ions or homolytic bond cleavage to yield radicals. A fishhook arrow is used to represent the motion of a single electron in homolytic bond cleavage. There are two main sources from which radicals can be formed:
Radicals from spin-paired molecules:
Radicals can be obtained from spin-paired molecules either by homolysis or electron transfer. While two radicals are formed in the former, an electron is added in the...
Radicals from spin-paired molecules:
Radicals can be obtained from spin-paired molecules either by homolysis or electron transfer. While two radicals are formed in the former, an electron is added in the...
2.1K
Radical Formation: Elimination
1.7K
Another method of radical formation is the elimination process. It is the opposite of the addition route and is driven by the instability of the radical. For example, as depicted in Figure 1, dibenzoyl peroxide yields a pair of unstable radicals upon homolysis. Given its instability, this radical spontaneously undergoes elimination via a C–C bond cleavage to form a relatively more stable phenyl radical. The mechanism involves cleavage of the bond between the α and β positions...
1.7K


