相关实验视频
Updated: Jun 23, 2025

07:43
Assaying Proteasomal Degradation in a Cell-free System in Plants
Published on: March 26, 2014
14.5K
人类和植物中的替代蛋白形和蛋白形依赖组件.
Claire D McWhite1, Wisath Sae-Lee2, Yaning Yuan3
1Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, 08544, USA. cmcwhite@princeton.edu.
Molecular systems biology
|June 25, 2024
概括
蛋白质切断,大约1%的人类和植物观察到的蛋白质,由基因表达或裂变引起. 这些变异,通常发生在蛋白质域之间,为蛋白质复杂性和进化提供了洞察力.
科学领域:
- 蛋白质组学是指蛋白质组学.
- 分子生物学分子生物学
- 进化生物学 进化生物学
背景情况:
- 蛋白质序列的变化驱动着蛋白质组的复杂性.
- 了解蛋白质变体对于生物发现至关重要.
研究的目的:
- 系统地调查人类和植物蛋白质组学数据,寻找蛋白质截断变体.
- 研究这些截断的蛋白质形式的起源和特征.
主要方法:
- 高通量自下而上的原生蛋白质组学.
- 蛋白序列和RNA异型的比较分析.
- 跨物种蛋白质组数据分析.
主要成果:
- 在人类,阿拉比多普西斯和克拉米多马纳斯中观察到的蛋白质中,大约有1%的蛋白质是截断的.
- 切断源于转录指导的过程或有限的蛋白质解体.
- 断层主要发生在结构蛋白域之间.
- 观察到新型蛋白质分解和核转移的例子.
- 一些切断类似于病毒裂变产品,并暗示古代起源.
结论:
- 蛋白质切断是真核生物中蛋白质组多样性的重要来源.
- 该研究揭示了新型蛋白质形式及其潜在的功能影响.
- 这些发现揭示了蛋白质变体的进化及其在蛋白质复合体形成中的作用.
相关概念视频
Protein Complex Assembly
10.6K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
10.6K
Protein Complexes with Interchangeable Parts
2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K
The Proteasome
8.6K
Eukaryotic cells can degrade proteins through several pathways. One of the most important amongst these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
8.6K
Genome Annotation and Assembly
18.8K
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
18.8K
Proteins: From Genes to Degradation
12.2K
Within a biological system, the DNA encodes the RNA, and the nucleotide sequence in the RNA further defines the amino acid sequence in the protein. This is referred to as “The Central Dogma of Molecular Biology” - a term coined by Francis Crick. Central dogma is a firm principle in biology that defines the flow of genetic information within any life form. The two fundamental steps in central dogma are - transcription and translation.
Transcription is the synthesis of RNA...
Transcription is the synthesis of RNA...
12.2K
Protein Transport to the Stroma
1.9K
Chloroplasts are triple membrane structures with an outer membrane, an inner membrane, and a thylakoid membrane, each containing distinct metabolite transporters, membrane translocons, and enzymes. Appropriate sorting and translocating these proteins to their correct membrane systems is essential for chloroplast function.
Protein complexes called the translocon of the outer chloroplast membrane or TOC complex, and the translocon of the inner chloroplast membrane or TIC complex mediate the...
Protein complexes called the translocon of the outer chloroplast membrane or TOC complex, and the translocon of the inner chloroplast membrane or TIC complex mediate the...
1.9K

