巴拉蒙迪鱼Lates calcarifer中的基因组结构变异以及在物种化和适应中的潜在作用
Matthew A Campbell1, Matthew C Hale2
1Centre for Carbon, Water and Food, The University of Sydney, 380 Werombi Road, Brownlow Hill, NSW 2570, Australia.
G3 (Bethesda, Md.)
|June 27, 2024
概括
在巴拉蒙迪鱼 (Lates calcarifer) 中发现了三种染色体反转,这可能解释了生命史特征的变化,并有助于水产养殖. 这些反转显示了这种广泛传播的物种在不同遗传系的不同模式.
科学领域:
- 基因组学就是基因组学.
- 进化生物学 进化生物学
- 水产养殖科学 水产养殖科学
背景情况:
- 染色体逆转是野生生物中显著的结构变异,抑制重组并保留局部适应的等位基因.
- 巴拉蒙迪 (Lates calcarifer) 是一个广泛的物种复合体,有三个遗传系 (AUS+NG,SEA,IND),表现出不同的生命历史和适应.
研究的目的:
- 为了识别和描述巴拉蒙迪的候选染色体逆转,跨越其主要遗传谱系.
- 调查这些染色体逆转与巴拉蒙迪鱼观察到的生命史变异之间的潜在联系.
主要方法:
- 利用了巴拉蒙迪鱼所有三种遗传系的基因组数据.
- 分析结构变异,专注于识别和描述多态候选染色体反转.
主要成果:
- 在Barramundi Perch.中确定了三种多态候选染色体反转.
- 在印度次大陆 (IND) 血统中观察到固定的祖先变异,在澳大利亚和新几内亚 (AUS+NG) 血统中观察到固定的倒置变异.
- 在东南亚 (SEA) 血统中发现了所有三种反转的变异.
结论:
- 鉴定的染色体逆转可能与巴拉蒙迪鱼观察到的多样化的生命史策略有关.
- 这些遗传发现可以为巴拉蒙迪鱼的水产养殖生产和种群管理策略提供信息.
相关概念视频
Genetics of Speciation
19.2K
Speciation is the evolutionary process resulting in the formation of new, distinct species—groups of reproductively isolated populations.
19.2K
Speciation Rates
21.2K
Overview
21.2K
Formation of Species
39.2K
Speciation describes the formation of one or more new species from one or sometimes multiple original species. The resulting species are discrete from the parent species, and barriers to reproduction will typically exist. There are two primary mechanisms, speciation with and without geographic isolation—allopatric and sympatric speciation, respectively.
39.2K
Convergent Evolution
27.7K
Evolution shapes the features of organisms over time, ensuring that they are suited for the environments in which they live. Sometimes, selection pressure leads to the rise of similar but unrelated adaptations in organisms with no recent common ancestors, a process known as convergent evolution.
27.7K
Gene Duplication and Divergence
6.1K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.1K
Cis-regulatory Sequences
9.8K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
9.8K


