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基因组进化和转录组可塑性与Collettotrichum真菌对单和双植物的适应有关
Riccardo Baroncelli1,2, José F Cobo-Díaz3, Tiziano Benocci4
1Department of Agricultural and Food Sciences (DISTAL), University of Bologna, Viale Fanin 40-50, 40127 Bologna, Italy.
科莱托里奇菌的基因组揭示了它们与开花植物一起演变的过程. 这些植物病原体通过改变基因含量和调节来适应新宿主,影响植物细胞壁退化.
科学领域:
- 基因组学就是基因组学.
- 进化生物学 进化生物学
- 植物病理学 植物病理学
背景情况:
- 在全球范围内,Collettotrichum真菌在各种单和双植物中引起重大疾病.
- 这种属性是研究细度基因家族进化及其与生物适应的联系的有价值模型.
研究的目的:
- 为30种Colletotrichum物种提供基因组序列,涵盖该属的多样性.
- 为了研究Colletotrichum的进化史和宿主适应机制.
主要方法:
- 对30种Collettotrichum物种进行基因组测序.
- 遗传学和进化分析.
- 在四种适应宿主物种的比较转录组学.
主要成果:
- 科莱托里丘姆的祖先在白纪晚期出现,并行于开花植物的多样化.
- 证据表明,独立的宿主从二叶植物跳到单叶植物,同时减少植物细胞壁降解酶和扩展血统特异性基因.
- 对比转录组学表明基因含量得到保护,但在不同的植物宿主中具有多样化的转录调制.
结论:
- 祖先的Colletotrichum与二花植物有关.
- 特定的血统进化以适应单宿主,涉及显著的基因内容和调节网络的重塑.
- 包括转录因子在内的关键基因被确定为可能对植物细胞壁退化至关重要.
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