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相关概念视频

CRISPR and crRNAs02:53

CRISPR and crRNAs

17.0K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.0K
Homologous Recombination02:31

Homologous Recombination

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The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.4K
CRISPR01:59

CRISPR

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Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
50.5K
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
6.0K

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HnRNPA2B1 tunes antimycobacterial immune responses in macrophages through alternative splicing of <i>Irgm1</i>.

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相关实验视频

Updated: Jun 22, 2025

A Universal Protocol for Large-scale gRNA Library Production from any DNA Source
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A Universal Protocol for Large-scale gRNA Library Production from any DNA Source

Published on: December 6, 2017

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克里斯普软件:一种有效的方法来设计语境gRNA库.

Eric Malekos1, Christy Montano2, Susan Carpenter2

  • 1Department of Biomolecular Engineering, University of California Santa Cruz, California, USA.

bioRxiv : the preprint server for biology
|July 1, 2024
PubMed
概括
此摘要是机器生成的。

使用下一代测序数据,CRISPRware高效地为各种基因组区域设计了指导RNA库. 它使得基因基因特异性向成为可能,进步了对诸如主导负基因突变等疾病的基因疗法.

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A Customizable Protocol for String Assembly gRNA Cloning STAgR

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A New Toolkit for Evaluating Gene Functions using Conditional Cas9 Stabilization
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相关实验视频

Last Updated: Jun 22, 2025

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A Universal Protocol for Large-scale gRNA Library Production from any DNA Source

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A Customizable Protocol for String Assembly gRNA Cloning STAgR
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A Customizable Protocol for String Assembly gRNA Cloning STAgR

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科学领域:

  • 基因组学就是基因组学.
  • 分子生物学分子生物学
  • 生物信息学是一种生物信息学.

背景情况:

  • 在基因编辑方面,CRISPR-Cas9技术依赖指导RNA (gRNA).
  • 设计有效的gRNA需要考虑基因组上下文和变异.
  • 当前的方法可能在图书馆生成中缺乏效率或特异性.

研究的目的:

  • 介绍CRISPRware,一种高效的计算方法,用于设计全基因组导向RNA库.
  • 为了实现特定于环境和特定于等位基因的gRNA设计.
  • 为了促进基因治疗和功能基因组学中的应用.

主要方法:

  • 利用下一代测序数据进行gRNA设计.
  • 开发算法来识别转录,翻译和非编码区域.
  • 纳入基因变异分析,以定位特定的等位基因.

主要成果:

  • 克里斯普软件针对不同的基因组区域生成高效的gRNA库.
  • 该方法成功设计了特定于环境和特定于等位基因的gRNA.
  • 对于全基因组的gRNA库设计的证明能力.

结论:

  • 克里斯普尔软件为gRNA库生成提供了一个高效和多功能平台.
  • 对等位基因特异性的设计能力为精确基因疗法开辟了新的途径.
  • 该工具支持功能性基因组学研究,通过实现有针对性的干扰.