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相关概念视频

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

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Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
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Genomics02:02

Genomics

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Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
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Genomic DNA in Eukaryotes00:58

Genomic DNA in Eukaryotes

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Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
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Genetic Screens02:46

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Genetic screens are tools used to identify genes and mutations responsible for phenotypes of interest. Genetic screens help identify individuals or a group of people at risk of developing  genetic diseases and help them with early intervention, targeted therapy, and reproductive options.
Forward genetic screens
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DNA Microarrays02:34

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Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...
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Genome Annotation and Assembly03:36

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The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
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Updated: Jun 22, 2025

Pattern-based Search of Epigenomic Data Using GeNemo
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基因组探索器是基因组浏览器.

James Herson1, Markus Krummenacker2, Aaron Spaulding2

  • 1Advanced Technology and Systems Division, SRI International, Menlo Park, California, USA.

mSystems
|July 3, 2024
PubMed
概括
此摘要是机器生成的。

基因组探索器是一个新的基因组浏览器,提供快速,直观的基因组数据可视化. 它使生物学家能够探索具有高信息密度和流导航的基因组,以便更好地解释数据.

关键词:
基因组 基因组是基因组的组成部分.基因组浏览器 基因组浏览器

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Genome-wide Snapshot of Chromatin Regulators and States in Xenopus Embryos by ChIP-Seq
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Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
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Last Updated: Jun 22, 2025

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Genome-wide Snapshot of Chromatin Regulators and States in Xenopus Embryos by ChIP-Seq
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Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
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科学领域:

  • 基因组学就是基因组学.
  • 生物信息学是一种生物信息学.
  • 计算生物学 计算生物学

背景情况:

  • 基因组浏览器是可视化和探索复杂基因组数据的重要工具.
  • 现有的浏览器可能很慢,缺乏足够的细节来进行全面的分析.
  • 有效的可视化有助于科学家们回答关键的生物学问题.

研究的目的:

  • 介绍基因组探索器,一个显著更新的基因组浏览器.
  • 为用户提供近乎即时的缩放和穿越功能,用于基因组探索.
  • 通过更流,更直观的基因组导航和数据可视化来增强用户体验.

主要方法:

  • 将整个基因组数据下载到用户的Web浏览器以进行本地可视化.
  • 在本地动态生成可视化,以精确控制变焦和俯视功能.
  • 呈现的基因组特征具有高信息密度,与传统的数据轨迹形成鲜明对比.

主要成果:

  • 实现了几乎瞬间的基因组缩放和穿越.
  • 能够在不同的尺度之间快速移动,从整个基因组到单个序列.
  • 与基于轨道的浏览器相比,信息密度更高,提供了更多的上下文.
  • 实现了可选的数据轨道和用于高级分析的比较模式.

结论:

  • 基因组探索器为基因组数据探索提供了卓越的用户体验.
  • 浏览器的设计有助于更快,更直观地理解基因组信息.
  • 高信息密度和有效的导航辅助在解决复杂的生物查询.