通过蛋白质设计,划分水溶性和膜多基因细胞体中的氧化还原合作性
Benjamin J Hardy1, Paulina Dubiel1, Ethan L Bungay1
1School of Biochemistry, University of Bristol, Bristol, UK.
概括
新的蛋白质设计创造了简化的电子运输系统. 这些极简的蛋白质揭示了静电合,特别是在膜内,驱动多基因蛋白质的氧化还原合作性.
科学领域:
- 生物物理化学 生物物理化学
- 蛋白质工程是指蛋白质工程.
- 生物能源学 生物能源学
背景情况:
- 生物能量生成依赖于复杂的电子运输蛋白.
- 修改这些天然蛋白质用于研究或应用是具有挑战性的,因为它们的复杂性.
- De novo蛋白质设计提供了一种简化的方法来研究和设计生物能源系统.
研究的目的:
- 研究静电微环境和介电性质对新设计的多种蛋白质中氧化还原合作性的作用.
- 为了创建极简的,人工的导电子蛋白平台.
- 剖析生物能源过程的基本机制.
主要方法:
- 可溶和与膜结合的单和二蛋白质的新设计.
- 对氧化还原潜力的实验测量.
- 波桑-博尔兹曼连续电静电学计算.
- 电子转移能量的BioDC计算分析.
主要成果:
- 在可溶性和膜结构中的血红细胞位点在隔离状态下表现出相当的氧化还原潜力.
- 计算方法 (Poisson-Boltzmann和BioDC) 与实验发现一致.
- 在低电介质膜环境中埋葬显著增强了heme-heme静电合.
结论:
- 设计的二甲细胞染色体中的氧化还原合作性主要由二甲静电合控制.
- 膜埋葬作为这种静电合效应的显著放大器.
- 新设计的蛋白质为理解复杂的自然生物能量组件提供了有价值的极简模型.
相关概念视频
The Supercomplexes in the Crista Membrane
2.5K
The mitochondrial cristae membrane is the primary site for the oxidative phosphorylation (OXPHOS) process of energy conversion mediated through respiratory complexes I to V. These complexes have been widely studied for decades, and it has been proven that they form supramolecular structures called respiratory supercomplexes (SC). These higher-order complexes may be crucial in maintaining the biochemical structure and improving the physiological activity of the individual complexes while...
2.5K
Electron Transport Chain: Complex III and IV
7.3K
During the electron transport chain, electrons from NADH and FADH2 are first transferred to complexes I and II, respectively. These two complexes then transfer the electrons to ubiquinol, which carries them further to complex III. Complex III passes the electrons across the intermembrane space to Cyt c, which carries them further to complex IV. Complex IV donates electrons to oxygen and reduces it to water. As electrons pass through complexes I, III, and IV, the energy released aids the pumping...
7.3K
Cooperative Allosteric Transitions
7.9K
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
7.9K
Electron Transport Chain: Complex I and II
12.8K
The mitochondrial electron transport chain (ETC) is the main energy generation system in the eukaryotic cells. However, mitochondria also produce cytotoxic reactive oxygen species (ROS) due to the large electron flow during oxidative phosphorylation. While Complex I is one of the primary sources of superoxide radicals, ROS production by Complex II is uncommon and may only be observed in cancer cells with mutated complexes.
ROS generation is regulated and maintained at moderate levels necessary...
ROS generation is regulated and maintained at moderate levels necessary...
12.8K
Oxidation of Phenols to Quinones
3.0K
In the presence of oxidizing agents, phenols are oxidized to quinones. Quinones can be easily reduced back to phenols using mild reducing agents. The electron-donating hydroxyl group enhances the reactivity of the aromatic ring, enabling oxidation of the ring even in the absence of an α hydrogen.
o-hydroxy phenols are oxidized to o-quinones and p-hydroxy phenols to p-quinones. Such redox reactions involve the transfer of two electrons and two protons. The reversible redox...
o-hydroxy phenols are oxidized to o-quinones and p-hydroxy phenols to p-quinones. Such redox reactions involve the transfer of two electrons and two protons. The reversible redox...
3.0K
Oxidation and Reduction of Organic Molecules
6.4K
Energy production within a cell involves many coordinated chemical pathways. Most of these pathways are combinations of oxidation and reduction reactions, which occur at the same time. An oxidation reaction strips an electron from an atom in a compound, and the addition of this electron to another compound is a reduction reaction. Because oxidation and reduction usually occur together, these pairs of reactions are called redox reactions.
The removal of an electron from a molecule, results in a...
The removal of an electron from a molecule, results in a...
6.4K
![Protein Film Infrared Electrochemistry Demonstrated for Study of H2 Oxidation by a [NiFe] Hydrogenase](/_next/image?url=https%3A%2F%2Fcloudfront.jove.com%2FCDNSource%2Fteasers%2F55858.jpg&w=3840&q=50)

