用RNA和DNA结合螺旋转螺旋蛋白对菌体进行抗CRISPR控制
Nils Birkholz1,2,3,4, Kotaro Kamata1,2, Maximilian Feussner5
1Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.
Nature
|July 10, 2024
概括
一种新型调节蛋白,Aca2,使用其螺旋转螺旋域通过DNA和RNA结合来控制菌体的抗CRISPR基因表达,防止感染期间的毒性过度表达.
科学领域:
- 分子生物学
- 遗传学
- 微生物学
背景情况:
- 基因表达的调节对细胞功能至关重要.
- 螺旋转螺旋域 (HTH) 蛋白质是关键的调节剂.
- 菌体使用抗CRISPR (acr) 基因来逃避细菌防御,而HTH蛋白 (Aca) 抑制它们的表达.
研究的目的:
- 研究HTH调节器如何在菌体感染期间管理抗CRISPR的产生.
- 确定Aca2控制acr基因表达的机制.
- 了解HTH域的双重DNA和RNA结合能力.
主要方法:
- 用冷电子显微镜可视化Aca2-RNA复合体.
- 研究DNA和RNA结合的生物化学测试.
- 分析Aca2蛋白家族中的调节机制.
主要成果:
- Aca2通过DNA结合来抑制反CRISPR的合成.
- Aca2还通过结合RNA干环来抑制mRNA的翻译,从而阻断核糖体的进入.
- 低温EM结构显示Aca2的HTH域区分DNA和RNA结合点.
结论:
- Aca2采用双重调节机制 (DNA和RNA结合) 来精确控制抗CRISPR基因表达.
- 在快速的菌体复制过程中,这种双重调控可以有效地抑制CRISPR-Cas,而不会造成有害的过度表达.
- HTH 域是多功能调节器,在许多蛋白质家族中具有双重DNA/RNA结合的潜力.
相关概念视频
CRISPR and crRNAs
16.9K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
16.9K
CRISPR
50.4K
Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
50.4K
RNA Interference
26.0K
RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
26.0K
Experimental RNAi
6.1K
RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
6.1K
Types of RNA
63.5K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
63.5K
Conservative Site-specific Recombination and Phase Variation
6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
6.0K


