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相关概念视频

Circadian Rhythms and Gene Regulation02:19

Circadian Rhythms and Gene Regulation

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The biological clock is involved in many aspects of regulating complex physiology in all animals. It was in 1935 when German zoologists, Hans Kalmus and Erwin Bünning, discovered the existence of circadian rhythm in Drosophila melanogaster. However, the internal molecular mechanisms behind the circadian clock remained a mystery until 1984, when Jeffrey C. Hall, Michael Rosbash, and Michael W. Young discovered the expression of the Per gene oscillating over a 24-hour cycle. In subsequent...
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Prokaryotic Transcriptional Activators and Repressors01:58

Prokaryotic Transcriptional Activators and Repressors

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The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
Transcription of prokaryotic...
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RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

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Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
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Positive Regulator Molecules01:45

Positive Regulator Molecules

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To consistently produce healthy cells, the cell cycle—the process that generates daughter cells—must be precisely regulated.
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Cooperative Binding of Transcription Regulators02:13

Cooperative Binding of Transcription Regulators

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Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome.  Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form...
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Operons02:09

Operons

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Prokaryotes can control gene expression through operons—DNA sequences consisting of regulatory elements and clustered, functionally related protein-coding genes. Operons use a single promoter sequence to initiate transcription of a gene cluster (i.e., a group of structural genes) into a single mRNA molecule. The terminator sequence ends transcription. An operator sequence, located between the promoter and structural genes, prohibits the operon’s transcriptional activity if bound by...
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In Vitro Bioluminescence Assay to Characterize Circadian Rhythm in Mammary Epithelial Cells
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由单个激活器-抑制器循环产生的生物节奏,具有不均性和扩散性.

Pablo Rojas1, Oreste Piro1,2,3, Martin E Garcia1

  • 1Theoretical Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany.

Physical review letters
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概括

一对简单的生化反应对与空间分离的反应场所可以产生持续的生物振荡. 这一发现简化了昼夜节律的模型,并激发了新的体外时钟设计.

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Monitoring Cell-autonomous Circadian Clock Rhythms of Gene Expression Using Luciferase Bioluminescence Reporters
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科学领域:

  • 生物化学 生物化学
  • 系统生物学 系统生物学
  • 生物物理学的生物物理.

背景情况:

  • 传统的昼夜节律模型依赖于复杂的,多步骤的负反循环,在混合良好的区间内.
  • 这些模型通常将空间运输视为额外的反应步骤,增加复杂性.
  • 现有的模型需要多个中间反应步骤来产生振荡.

研究的目的:

  • 为了证明最小的生化系统可以产生持续的振荡.
  • 挑战人们对昼夜节律复杂性的传统理解.
  • 提出一个简化的生物振荡模型.

主要方法:

  • 一个单一的激活-抑制生化反应对的理论建模.
  • 包含空间分离的反应场所.
  • 通过扩散介导的分子运输的分析.

主要成果:

  • 一个单一的激活-抑制反应对与空间分离的网站是足够的持续振荡.
  • 这种简化的系统可以产生振荡,而不需要多个中间步骤.
  • 扩散介导的分子运输是振荡行为的关键.

结论:

  • 生物振荡的最简单的配置涉及空间分离的反应和扩散.
  • 这一发现为了解生物钟提供了新的概念基础.
  • 该模型可以启发设计最小的体外测试,用于构建生物钟.