在受体细菌中,水平转移的真核细胞内含基因的快速功能激活
Wen Yuan1,2, Jing Yu1,3, Zhichao Li1,2
1National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China.
Nucleic acids research
|July 16, 2024
概括
细菌可以快速激活转移的真核基因,通过删除克服内核障碍或使用完整的内核融合分裂蛋白质,使基因功能和进化.
科学领域:
- 进化生物学 进化生物学
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
背景情况:
- 水平基因转移 (HGT) 是所有生命领域进化的重要驱动力.
- 转移到细菌中的真核基因往往含有内子,这构成了表达挑战.
- 细菌克服HGT内屏障的机制尚不清楚.
研究的目的:
- 研究细菌如何在水平转移的基因中克服真核内核的表达障碍.
- 确定使细菌中内核含有真核基因的功能表达成为可能的机制.
主要方法:
- 在大肠杆菌中证实了以内部介导的基因失活.
- 在选择性培养下进行大规模的基因选,以确定基因激活事件.
- 对基因激活事件的分子分析,以阐明潜在的机制.
主要成果:
- 横向转移的真核基因中的内子使大肠杆菌中的基因功能失活.
- 在选择性压力下,基因功能激活发生迅速 (几天内).
- 确定了两种突破内部屏障的独特机制:部分内部删除和分裂蛋白质的完整的内部介导融合.
结论:
- 细菌可以通过特定的遗传机制快速演变含有内核的真核基因的功能表达.
- 通过删除或促进新型蛋白质相互作用来克服内子,从而实现适应.
- 如果将真核基因的HGT转化为 prokaryotes,可以导致快速的功能获取,如果赋予选择性优势.
相关概念视频
Exon Recombination
3.6K
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon...
Exon shuffling follows “splice frame rules.” Each exon...
3.6K
Conservative Site-specific Recombination and Phase Variation
6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
6.0K
DNA-only Transposons
14.4K
DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
The donor site from where the transposon is excised is either degraded or...
The donor site from where the transposon is excised is either degraded or...
14.4K
Bacterial RNA Polymerase
29.4K
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
29.4K
Prokaryotic Transcriptional Activators and Repressors
20.9K
The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
Transcription of prokaryotic...
Transcription of prokaryotic...
20.9K
LTR Retrotransposons
17.4K
LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
17.4K


