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相关概念视频

DNA Helicases00:55

DNA Helicases

21.3K
DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
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DNA Isolation01:24

DNA Isolation

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DNA isolation protocols can be fast and straightforward or complex and time-consuming depending on the type and quality of DNA required for further processing. For example, plasmid DNA extraction is a bit more complicated than genomic DNA extraction because of the need for an appropriate lysis method to separate plasmid DNA from gDNA during isolation. However, for specific applications, such as long-range DNA sequencing that require a good yield of high- quality DNA samples, we need to follow...
38.7K
Replication in Eukaryotes01:29

Replication in Eukaryotes

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In eukaryotic cells, DNA replication is highly conserved and tightly regulated. Multiple linear chromosomes must be duplicated with high fidelity before cell division, so there are many proteins that fulfill specialized roles in the replication process. Replication occurs in three phases: initiation, elongation, and termination, and ends with two complete sets of chromosomes in the nucleus.
Many Proteins Orchestrate Replication at the Origin
Eukaryotic replication follows many of the same...
13.7K
Replication in Prokaryotes01:32

Replication in Prokaryotes

24.8K
DNA replication has three main steps: initiation, elongation, and termination. Replication in prokaryotes begins when initiator proteins bind to the single origin of replication (ori) on the cell's circular chromosome. Replication then proceeds around the entire circle of the chromosome in each direction from the two replication forks, resulting in two DNA molecules.
Many Proteins Work Together to Replicate the Chromosome
Replication is coordinated and carried out by a host of specialized...
24.8K
DNA as a Genetic Template02:05

DNA as a Genetic Template

21.9K
Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...
21.9K
DNA Topoisomerases02:02

DNA Topoisomerases

31.2K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
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相关实验视频

Updated: Jun 20, 2025

Author Spotlight: Unraveling the Dynamics of Eukaryotic DNA Replication Through Single-Molecule Visualization
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Author Spotlight: Unraveling the Dynamics of Eukaryotic DNA Replication Through Single-Molecule Visualization

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一个大气泡驱动循环DNA融化.

Souradeep Sengupta1, Somendra M Bhattacharjee1, Garima Mishra1

  • 1Department of Physics, Ashoka University, Sonipat, Haryana - 131029, India. garima.mishra@ashoka.edu.in.

Physical chemistry chemical physics : PCCP
|July 19, 2024
PubMed
概括

循环DNA融化是由大气泡驱动的,类似于线性DNA. 较小的圆形DNA由于短暂的泡而表现出更高的热稳定性,这种效应随着长度的增加而减少.

科学领域:

  • 生物物理学的生物物理.
  • 计算生物学 计算生物学
  • 分子生物学分子生物学

背景情况:

  • 溶解DNA对于生物过程至关重要.
  • 超卷影响DNA的稳定性和融化.
  • 了解循环DNA融化对于各种应用至关重要.

研究的目的:

  • 研究非超绕圆形DNA的融化过渡.
  • 比较圆形和线性DNA的融化行为.
  • 分析DNA长度对热稳定性的影响.

主要方法:

  • 布朗的动力学模拟.
  • 分析平均基对距离的各行各业变化.
  • 模拟DNA融化过渡的模型.

主要成果:

  • 圆形DNA的融化主要是由大气泡形成驱动的.
  • 圆形DNA的融化行为非常类似于线性DNA的融化行为.
  • 较短的圆形DNA与线性DNA相比显示出更高的热稳定性,这归因于短暂的小气泡.

结论:

  • 非超螺旋圆形DNA化的特点是形成大气泡.

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A Droplet-Based Microfluidic Approach and Microsphere-PCR Amplification for Single-Stranded DNA Amplicons
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Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
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  • 圆形和线性DNA之间的长度依赖的热稳定性差异在短尺度上存在.
  • 短暂的小气泡有助于增强较小的圆形DNA的稳定性.