硫尿素与二衍生物共结晶中的二叉键的模式:实验和量子理论研究
Kinga Wzgarda-Raj1, Adrian Olszewski2, Marcin Palusiak1
1University of Lodz, Faculty of Chemistry, Department of Physical Chemistry, Pomorska 163/165, 90-236 Lodz, Poland.
Acta crystallographica. Section C, Structural chemistry
|July 19, 2024
概括
这项研究详细介绍了氨酸联合晶体与氧化N-氧化物和氨酸的晶体结构. 它揭示了关键的结合相互作用,包括新的分叉结合,对于晶体组装至关重要.
科学领域:
- 晶体工程 晶体工程
- 超分子化学 超分子化学
- 材料科学 材料科学 材料科学
背景情况:
- 尿素是形成共晶的多功能分子.
- 了解分子间相互作用是设计晶体材料的关键.
- 皮拉зин N-氧化物和氨酸是含有的异环,具有结的潜力.
研究的目的:
- 为了合成和表征thiourea与pyrazine N-oxide和phenazine的共同晶体.
- 为了阐明这些共晶体中的结合模式和超分子组合.
- 用计算方法研究特定键图案的作用.
主要方法:
- 单晶X射线衍射以确定晶体结构.
- 对键相互作用 (N-H...N,R2^2(8) 的分析.
- 量子化学计算以检查新出现的键模式.
主要成果:
- 成功合成了两种共晶体:氨酸-皮拉N-氧化物 (2/1) 和氨酸-氨酸 (6/7).
- 这两种共晶体都在单临床空间组P21/c.中结晶.
- 确定了N-H...N键,氨酸分子之间的R2^2(8) 合成键,以及涉及氨酸和异环成分的显著的二叉键.
结论:
- 晶体结构揭示了各种各样的键网络,稳定了共晶体.
- 双叉键在超分子结构中起着至关重要的作用.
- 量子化学分析支持观察到的结构特征和结合相互作用.
相关概念视频
Diazonium Group Substitution: –OH and –H
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Nitrous acid, a weak acid, is prepared in situ via the reaction of sodium nitrite with a strong acid under cold conditions. This nitrous acid prepared in situ reacts with primary arylamines to form arenediazonium salts. Such reactions are known as diazotization reactions. As shown in Figure 1, the formation of arenediazonium salts begins with the decomposition of nitrous acid in an acidic solution to give nitrosonium ions.
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Diazonium Group Substitution with Halogens and Cyanide: Sandmeyer and Schiemann Reactions
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Arenediazonium substitution reactions occur when the diazonium group is substituted by various functional groups such as halides, hydroxyl, nitrile, etc. For instance, arenediazonium salts react with copper(I) salts of chloride, bromide, or cyanide to form corresponding aryl chlorides, bromides, and nitriles. These reactions are named Sandmeyer reactions. Although the mechanism of this reaction is complicated, as illustrated in Figure 1, they are believed to progress via an aryl copper...
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Aryldiazonium Salts to Azo Dyes: Diazo Coupling
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The reaction of weakly electrophilic aryldiazonium (also called arenediazonium) salts with highly activated aromatic compounds leads to the formation of products with an —N=N— link, called an azo linkage. This reaction, presented in Figure 1, is known as diazo coupling and occurs without the loss of the nitrogen atoms of the aryldiazonium salt. Highly activated aromatic compounds such as phenols or arylamines favor the diazo coupling reaction. The coupling generally occurs at the...
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1° Amines to Diazonium or Aryldiazonium Salts: Diazotization with NaNO2 Mechanism
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Nitrous acid is a relatively weak and unstable acid prepared in situ by the reaction of sodium nitrite and cold, dilute hydrochloric acid. In an acidic solution, the nitrous acid undergoes protonation when it loses water to form a nitrosonium ion—an electrophile. Nitrous acid reacts with primary amines to give diazonium salts. The reaction is called diazotization of primary amines.
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Preparation of Amides
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Amides are synthesized by treating carboxylic acids with amines in the presence of dehydrating agents like dicyclohexylcarbodiimide (DCC).
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
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Structures of Carboxylic Acid Derivatives
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Structure of Carboxylic Acid Derivatives
Carboxylic acid derivatives contain an acyl group attached to a heteroatom such as chlorine, oxygen, or nitrogen. The carbonyl carbon and oxygen are both sp2-hybridized with an unhybridized p orbital.
The three sp2 orbitals of the carbonyl carbon form three σ bonds, one each with the carbonyl oxygen, the α carbon, and the heteroatom, whereas the other two sp2 orbitals of the carbonyl oxygen are occupied by the lone pairs. Further, the...
Carboxylic acid derivatives contain an acyl group attached to a heteroatom such as chlorine, oxygen, or nitrogen. The carbonyl carbon and oxygen are both sp2-hybridized with an unhybridized p orbital.
The three sp2 orbitals of the carbonyl carbon form three σ bonds, one each with the carbonyl oxygen, the α carbon, and the heteroatom, whereas the other two sp2 orbitals of the carbonyl oxygen are occupied by the lone pairs. Further, the...
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