从C(4a) - ((hydro) peroxyflavin中以水为辅助的过氧化形成的DFT建模
1Department of Chemistry, Faculty of Science and Letters, İstanbul Technical University, İstanbul, Turkiye.
甲类单氧酶可以防止有害的过氧化的形成. kynurenine 3-monooxygenase (KMO) 使用绝缘,而不是活性站点架构,以确保适当的单氧化并避免解反应.
科学领域:
- 生物化学 生化学
- 酶学 是一种酶学.
- 计算化学的计算化学
背景情况:
- 甲类单氧化酶在进入活性部位之前利用外部减少的辅因子.
- 从反应性中间体中形成有害过氧化的可能性需要对酶防御机制进行研究.
研究的目的:
- 研究单氧化酶活性部位对过氧化形成的防御机制.
- 为了确定 kynurenine 3-monooxygenase (KMO) 中解反应的屏障能量.
主要方法:
- 在水状条件下,水分子介导的解反应的计算屏障能量.
- 在KMO活性部位内模拟解,使用258原子集群方法.
主要成果:
- 通过水介导的解反应表现出轻易的屏障能量.
- KMO的活跃站点架构本身并不抑制解;屏障能量与水态条件相当.
- 活性部位内的过氧化形成障碍明显低于单氧化.
结论:
- 对于KMO对过氧化的形成的主要防御是活性位点绝缘.
- 这种绝缘对于通过防止过早脱而使单氧化成为可能至关重要.
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