Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Protein Modifications in the RER01:26

Protein Modifications in the RER

5.1K
Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal...
5.1K
IUPAC Nomenclature of Ketones01:09

IUPAC Nomenclature of Ketones

5.6K
Like aldehydes, ketones are named using IUPAC rules; in this case, by replacing “e” in the name of the longest hydrocarbon chain with “one.” In acyclic ketones, the ketonic carbon is given the lowest locant value. For instance, as shown below, a simple five-carbon ketone is named pentan-2-one, instead of pentan-4-one. IUPAC rules also allow the placing of the locant value before the parent name to give an alternate name, 2-pentanone.
5.6K
Overview of Fatty Acid Metabolism01:28

Overview of Fatty Acid Metabolism

30.3K
Lipids also are sources of energy that power cellular processes. Like carbohydrates, lipids are composed of carbon, hydrogen, and oxygen, but these atoms are arranged differently. Most lipids are nonpolar and hydrophobic. Major types include fats and oils, waxes, phospholipids, and steroids.
Fatty acids are catabolized in a process called beta-oxidation, which takes place in the matrix of the mitochondria and converts their fatty acid chains into two-carbon units of acetyl groups. The acetyl...
30.3K
Protein Folding Quality Check in the RER01:29

Protein Folding Quality Check in the RER

3.7K
ER is the primary site for the maturation and folding of soluble and transmembrane secretory proteins. The calnexin cycle is a specific chaperone system that folds and assesses the confirmation of N-glycosylated proteins before they can exit the ER lumen. The primary players of this quality check pipeline are the lectins, ER-resident chaperones, and a glucosyl transferase enzyme. In case the calnexin system in the lumen fails to salvage a misfolded protein, it is transported to the cytoplasm...
3.7K
Bioavailability: Overview01:13

Bioavailability: Overview

2.7K
Bioavailability refers to the proportion of an unaltered drug that, after administration, enters the systemic circulation and can be distributed to the desired action site. Factors such as gastrointestinal (GI) absorption and liver biotransformation influence the bioavailability of a drug when it is administered orally. When a drug is administered intravenously, it enters the systemic circulation directly; by definition, its bioavailability is assumed to be 100%. The bioavailability of an...
2.7K
Bioremediation00:46

Bioremediation

18.2K
Bioremediation is the use of prokaryotes, fungi, or plants to remove pollutants from the environment. This process has been used to remove harmful toxins in groundwater as a byproduct of agricultural run-off and also to clean up oil spills.
18.2K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

VIOLIN: A modular framework for scalable reconciliation of heterogeneous interaction graphs.

bioRxiv : the preprint server for biology·2026
Same author

Context-aware knowledge selection and reliable model recommendation with ACCORDION.

Frontiers in systems biology·2025
Same author

Automating Knowledge-Driven Model Recommendation: Methodology, Evaluation, and Key Challenges.

IEEE transactions on computational biology and bioinformatics·2025
Same author

An open-set semi-supervised multi-task learning framework for context classification in biomedical texts.

Journal of biomedical informatics·2025
Same author

Web-based ecological evidence entry form enables consistent, accessible extraction and visualization for synthesis applications.

Conservation science and practice·2025
Same author

Echinobase: a resource to support the echinoderm research community.

Genetics·2024
Same journal

Rational Design of Linalool Dehydratase-Isomerase Enables Efficient Conversion of Phytol to Neophytadiene.

ACS synthetic biology·2026
Same journal

<i>De Novo</i> Biosynthesis of Polyphyllin V in <i>Nicotiana benthamiana</i> through Pathway Reconstruction and UDP-Sugar Engineering.

ACS synthetic biology·2026
Same journal

Rapid and Continuous Directed Evolution in <i>Vibrio natriegens</i> Utilizing an <i>In Vivo</i> Hypermutation System.

ACS synthetic biology·2026
Same journal

Machine Learning for Microbial Cell Factories: Pathway Design, Enzyme Engineering, and Metabolic Regulation.

ACS synthetic biology·2026
Same journal

Microfluidics-Based Engineering of Molecular Self-Assembly and Manufacturing for Artificial Cell Systems.

ACS synthetic biology·2026
Same journal

Beyond Compartmentalization: Deciphering Reaction Kinetics in Liquid-Liquid Phase Separation for Rational Biotechnological Design.

ACS synthetic biology·2026
查看所有相关文章

相关实验视频

Updated: Jun 19, 2025

A Web Tool for Generating High Quality Machine-readable Biological Pathways
08:01

A Web Tool for Generating High Quality Machine-readable Biological Pathways

Published on: February 8, 2017

17.6K

生物RECIPE知识表示格式的知识表示格式.

Emilee Holtzapple, Gaoxiang Zhou, Haomiao Luo

  • 1Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States.

ACS synthetic biology
|July 25, 2024
PubMed
概括
此摘要是机器生成的。

生物RECIPE是生物系统的新知识格式. 它标准化了信号通路的可执行模型,使人机交互更容易,并与系统和合成生物学中的各种工具兼容.

关键词:
公平的原则 公平的原则自动化自动化自动化自动化建模 建模模型 建模模型网络 网络 网络 网络 网络 网络代表格式的表示格式.信号通道的信号通道.

更多相关视频

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

1.6K
A Protocol for the Production of KLRG1 Tetramer
07:24

A Protocol for the Production of KLRG1 Tetramer

Published on: January 12, 2010

10.0K

相关实验视频

Last Updated: Jun 19, 2025

A Web Tool for Generating High Quality Machine-readable Biological Pathways
08:01

A Web Tool for Generating High Quality Machine-readable Biological Pathways

Published on: February 8, 2017

17.6K
A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

1.6K
A Protocol for the Production of KLRG1 Tetramer
07:24

A Protocol for the Production of KLRG1 Tetramer

Published on: January 12, 2010

10.0K

科学领域:

  • 系统生物学 系统生物学
  • 合成生物学 合成生物学
  • 计算生物学 计算生物学

背景情况:

  • 标准化对于开发和共享可执行的生物模型至关重要.
  • 当前的格式可能会阻碍人机交互和互操作性.
  • 促进模型的创建,验证和策划对于生物研究至关重要.

研究的目的:

  • 介绍BioRECIPE (生物系统表示用于评估,策划,互操作,保存和执行) 的知识表示格式.
  • 为细胞内和细胞间信号传输创建和管理可执行模型的标准化.
  • 在生物建模中增强人机交互.

主要方法:

  • 开发了一个名为BioRECIPE的新型知识表示格式.
  • 保证生物食谱是人类可读和机器可读的.
  • 设计的BioRECIPE与现有的自然语言处理,建模和数据库工具兼容.

主要成果:

  • BioRECIPE标准化了用于建模的生物系统的表示方式.
  • 该格式方便用户轻松预览和修改模型组件.
  • 生物RECIPE模型可以通过一套模型开发和分析工具进行处理.
  • 实现了与各种代表格式和社区资源的兼容性.

结论:

  • 生物RECIPE提供了一个标准化的方法来代表生物知识.
  • 该格式增强了可执行生物模型的创建,策划和执行.
  • 生物RECIPE促进互操作性,并促进系统和合成生物学方面的进步.