在转化合成中蛋白质组合
Gianluca A Arianna1, Dmitry M Korzhnev1
1Department of Molecular Biology and Biophysics, University of Connecticut Health Center, Farmington, CT 06030, USA.
Genes
|July 27, 2024
概括
转化合成 (TLS) 使用专门的聚合酶来复制DNA的损伤,通过突变保持遗传完整性. 最近的Cryo-EM研究揭示了这些DNA修复酶如何在TLS全酶组合中合作.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生化学
背景情况:
- 转载合成 (TLS) 是真核生物中关键的DNA损伤耐受机制.
- 专门的DNA聚合酶 (例如,Y家族,Polζ) 绕过DNA损伤,使复制能够进行.
- TLS聚合酶聚集在PCNA滑动上,形成一个TLS突变组合体.
研究的目的:
- 审查TLS聚合酶的结构研究.
- 阐明TLS全酶组合的合作机制.
- 要突出最近的高分辨率冷电子显微镜 (Cryo-EM) 研究的见解.
主要方法:
- 对TLS聚合酶现有结构研究的审查.
- 在TLS复合体内分析蛋白质与蛋白质相互作用 (PPI).
- 整合了全酶组件的高分辨率 Cryo-EM 研究的数据.
主要成果:
- 个别的TLS聚合酶结构和病变绕道机制的特征是很好的.
- 以前,TLS全酶的合作组合和功能是难以捉摸的.
- 最近的冷EM研究为TLS全酶作用提供了前所未有的结构洞察力.
结论:
- 了解TLS全酶组合是理解DNA损伤耐受性的关键.
- 化电磁波已经彻底改变了像TLS突变体这样复杂的分子机器的研究.
- 这次审查巩固了结构知识,为未来对TLS机制的研究铺平了道路.
更多相关视频
09:57Examining Proteasome Assembly with Recombinant Archaeal Proteasomes and Nondenaturing PAGE: The Case for a Combined Approach
Published on: December 17, 2016
6.6K
08:15Self-Assembly of Gamma-Modified Peptide Nucleic Acids into Complex Nanostructures in Organic Solvent Mixtures
Published on: June 26, 2020
4.2K
相关概念视频
Translesion DNA Polymerases
9.9K
Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
9.9K
Protein Complex Assembly
10.6K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
10.6K
The Replisome
33.3K
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
33.3K
Restarting Stalled Replication Forks
5.8K
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.8K
Homologous Recombination
50.4K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.4K
Assembly of Cytoskeletal Filaments
18.9K
Cytoskeletal filaments are polymeric forms of smaller protein subunits. However, individual cytoskeletal filaments may easily disassemble or associate with other similar filaments to form rigid structures. Microfilaments, made of actin monomers, rely on actin-binding proteins to form bundles and create networks of individual actin filaments. Microtubules rely on microtubule-associated proteins (MAPs) to form sturdy cylindrical structures. However, the proteins involved in forming complex...
18.9K
