VEGFR2化学空间的变化:刺激和抑制
Claudiu N Lungu1,2, Ionel I Mangalagiu2, Gabriela Gurau1,2
1Department of Functional and Morphological Science, Faculty of Medicine and Pharmacy, Dunarea de Jos University, 800010 Galati, Romania.
International journal of molecular sciences
|July 27, 2024
概括
这项研究探讨了血管内皮生长因子受体2 (VEGFR2) 的分子特性及其与刺激和抑制的相互作用. 结果显示了刺激剂和抑制剂的独特化学空间,尽管与VEGFR2.2存在一些重叠.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 计算化学计算化学
背景情况:
- 激酶通路对于血管功能至关重要,特别是血管生成和血管形态生成.
- 血管内皮生长因子受体2 (VEGFR2) 是这些过程中的一个关键目标.
- 了解VEGFR2相互作用对于开发向疗法至关重要.
研究的目的:
- 为了研究VEGFR2.2的分子特性.
- 分析VEGFR2与调节其活性 (刺激和抑制) 的酸之间的相互作用.
- 为了描述这些相互作用分子的化学空间.
主要方法:
- 对影响VEGFR2.2的酸进行了in silico研究.
- 拓和能量特性被用来描述的化学空间.
- 计算了对VEGFR2的刺激和抑制蛋白的化学模型.
- 分析了嵌合蛋白和VEGFR2之间的相互作用.
- 复杂的多元组和高维数据可视化被用来进行表征.
主要成果:
- 在VEGFR2和刺激和抑制之间观察到化学空间的轻微重叠.
- 发现刺激和抑制剂占据了不同的化学空间.
- 该研究基于VEGFR2相互作用和结构特征定义了关系.
结论:
- 刺激剂和抑制剂的独特化学空间表明,有可能开发出选择性调节器VEGFR2.
- 计算方法为分子相互作用和化学空间表征提供了宝贵的见解.
- 进一步的研究可以利用这些发现来针对血管生成相关疾病的向药物设计.
相关概念视频
Regulation of Angiogenesis and Blood Supply
2.5K
Rapidly dividing tumors, embryos, and wounded tissues require more oxygen than usual, lowering the oxygen concentration in the blood. At low oxygen or hypoxic conditions, an oxygen-sensitive transcription factor called the hypoxia-inducible factor 1 or HIF1 is activated. HIF1 is a dimeric protein of alpha (ɑ) and beta (β) subunits. Under optimal oxygen conditions, HIF1β is present in the nucleus while HIF1ɑ remains in the cytosol. HIF1ɑ is hydroxylated by prolyl...
2.5K
Transducer Mechanism: Enzyme-Linked Receptors
2.4K
Enzyme-linked receptors are cell-surface receptors acting as an enzyme or associating with an enzyme intracellularly. They make excellent drug targets. Drugs can bind to the extracellular ligand-binding domain or directly affect their enzymatic domain and alter their activity.
Major types that are helpful drug targets include:
Major types that are helpful drug targets include:
2.4K
Receptor Downregulation in MVBs
2.0K
Multivesicular bodies (MVBs) are mature endosomes that sort ubiquitinated proteins and then fuse with lysosomes to degrade the sorted proteins. Epidermal growth factor (EGF) and its receptor (EGFR) form a complex that can be internalized through endocytosis, sorted into an MVB, and later degraded.
The EGFR can initiate signaling pathways that lead to cell proliferation, migration, and differentiation. Overexpression of EGFR stimulates cells to proliferate. Excessive EGFR...
The EGFR can initiate signaling pathways that lead to cell proliferation, migration, and differentiation. Overexpression of EGFR stimulates cells to proliferate. Excessive EGFR...
2.0K
Receptor Tyrosine Kinases
12.6K
Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
12.6K
Amplifying Signals via Enzymatic Cascade
8.4K
When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze...
8.4K
The Two-State Receptor Model
1.9K
The two-state receptor model explains a drug's interaction with receptors, such as G protein-coupled receptors and ligand-gated ion channels, to induce or inhibit a biological response. When no natural ligands are present, a receptor exists in an equilibrium of inactive (Ri) and active (Ra) conformations. The inactive form does not produce a response, while the active form generates a basal effect known as constitutive activity.
The binding affinity of a drug determines its interaction with...
The binding affinity of a drug determines its interaction with...
1.9K


