以生物信息学和实验验证为基础,确定TFRC作为肺动脉高血压的生物标志物
Chuang Yang1, Yi-Hang Liu1, Hai-Kuo Zheng2
1Department of cardiology, The second hospital of Jilin University, Changchun, China.
Respiratory research
|August 3, 2024
概括
这项研究确定了TFRC作为肺动脉高血压 (PAH) 的潜在生物标志物. 在PAH患者的肺组织和血清中增加的TFRC表达和一个大鼠模型表明它对这种危及生命的疾病的诊断价值.
科学领域:
- 心肺医学 心肺医学
- 基因组学就是基因组学.
- 生物标志物发现发现
背景情况:
- 肺动脉高血压 (PAH) 是一种严重的慢性疾病,生物标志物研究有限.
- 现有的研究缺乏对PAH生物标志物基因表达特征的全面分析.
研究的目的:
- 确定肺动脉高血压 (PAH) 的新型基因表达生物标志物.
- 在患者队列和动物模型中验证已识别的生物标志物的诊断潜力.
主要方法:
- 结合并分析了两个基因表达数据集 (GSE131793,GSE113439) 以确定差异表达基因 (DEG).
- 利用权重基因共同表达网络分析 (WGCNA) 和蛋白质与蛋白质相互作用 (PPI) 网络分析来识别枢纽基因.
- 在独立数据集 (GSE53408,GSE22356) 和动物模型中进行了功能丰富分析 (GO,DO,KEGG,GSEA) 和验证了基因表达.
主要成果:
- 确定了914个DEG,其中722个是上调和192个是下调.
- 根据WGCNA和PPI的分析,TFRC被认为是一个重要的枢纽基因.
- 在验证数据集中,TFRC显示出强大的诊断价值,并且在PAH患者血清和肺高血压大鼠模型中得到上调.
结论:
- 生物信息分析显示,人类PAH肺组织中的TFRC表达增加,与患者数据和动物模型一致.
- TFRC显示出作为诊断肺动脉高血压的有价值生物标志物的潜力.
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