溶剂质量和非生物寡合物折叠:重新审视传统范式
Cedrix J Dongmo Foumthuim1,2, Tobia Arcangeli2,3, Tatjana Škrbić2
1INFN, Sezione di Roma Tor Vergata, Via della Ricerca Scientifica 1, 00133 Roma, Italy.
Soft matter
|August 5, 2024
概括
聚乙烯折叠体在水,n-hexane和cyclohexane中崩成螺旋结构. 折叠是由静电相互作用驱动的,而不是键,在溶剂中具有不同的稳定性.
科学领域:
- 聚合物科学 聚合物科学
- 计算化学的计算化学
- 超分子化学 超分子化学
背景情况:
- 折叠分子是合成的小聚体,模仿蛋白质的二次结构.
- 了解溶剂对折叠体形状的影响对于设计功能性材料至关重要.
研究的目的:
- 在不同的溶剂中研究元替代聚乙烯 (pPA) 折叠体的构造性行为.
- 阐明pPA折叠机折叠和稳定性的驱动力.
主要方法:
- 广泛的分子动力学 (MD) 原子学模拟.
- 对12mer,16mer和20mer的pPA寡合体进行了模拟.
- 分析包括结,静电和范德瓦尔斯相互作用,以及通过热力学集成计算自由能量.
主要成果:
- 在水,n-hexane和cyclohexane中,pPA折叠体具有崩成螺旋结构的倾向.
- 折叠稳定性有所不同:在水中稳定,在n-hexane中微弱稳定,在cyclohexane中不稳定.
- 静电相互作用是折叠的主要驱动力,在所有溶剂中几乎相同,而范德瓦尔斯相互作用不同.
- 与水的结合在折叠过程中没有作用.
结论:
- pPA折叠体的折叠主要由静电相互作用控制,独立于溶剂类型.
- 溶剂之间的稳定性差异归因于-补偿.
- 与像聚乙这样的类相比,pPA折叠体表现出明显的折叠行为.
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