银河座图:用于部署生产银河座服务器的标准化方法
Nuwan Goonasekera1, Alexandru Mahmoud2, Keith Suderman3
1Australian BioCommons, University of Melbourne, Melbourne, VIC 3052, Australia.
Bioinformatics (Oxford, England)
|August 6, 2024
概括
一个新的Galaxy Helm图表简化了为数据密集型科学部署生产级的Galaxy. 这种方法在Kubernetes上提供了快速,可扩展和可维护的安装,减少了管理负担.
科学领域:
- 生物信息学是一种生物信息学.
- 计算生物学 计算生物学
- 数据科学数据科学数据科学
背景情况:
- 银河系是一个流行的开源框架,用于数据密集型科学.
- 生产级的Galaxy安装是复杂的,需要大量的管理.
- 需要快速,可复制和可维护的银河系部署.
研究的目的:
- 描述银河系杆图表,以简化银河系部署.
- 提供一种快速和可重复的方法来安装生产级的Galaxy.
- 为了使高可用性银河系实例与最小的维护.
主要方法:
- 开发了一个银河系杆图表,以包装生产级银河系安装的所有组件.
- 设计了部署在Kubernetes集群上的图表.
- 封装了支持软件服务,并实施了运行Galaxy.com的最佳实践.
主要成果:
- 银河杆图是部署可扩展,生产级银河实例的最快方法.
- 该图表高度可配置,允许自定义依赖服务.
- 值得注意的应用包括在AnVIL上的自动部署以及作为AWS推的解决方案.
结论:
- 银河头盔图表大大简化了数据密集型科学的银河的部署和维护.
- 这个解决方案解决了对快速,可重复和高可用性的Galaxy安装的需求.
- 该图表可用于各种科学计算环境.
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