相关实验视频
Updated: Jun 17, 2025

07:44
High-throughput Purification of Affinity-tagged Recombinant Proteins
Published on: August 26, 2012
14.2K
通过RfaH介导的转录-翻译合的结构基础
Vadim Molodtsov1,2, Chengyuan Wang1,3, Jing Zhang3
1Waksman Institute and Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ, USA.
Nature structural & molecular biology
|August 8, 2024
概括
细菌蛋白RfaH在转录-翻译合过程中将RNA聚合酶 (RNAP) 与核糖体结合起来. 它的结构比它的对应NusG更多地限制了运动,揭示了RfaH在DNA ops网站上的功能.
科学领域:
- 分子生物学分子生物学
- 结构生物学 结构生物学
- 微生物学 微生物学
背景情况:
- 转录-翻译合对于细菌基因表达是必不可少的.
- 蛋白质RfaH是NusG的一种类型,它在特定的DNA部位 (称为Ops部位) 促进了这一过程.
- RfaH暂停RNA聚合酶 (RNAP) 并加载到它上,影响基因表达.
研究的目的:
- 确定涉及RfaH的转录-翻译复合体 (TTC) 的结构组织.
- 阐明RfaH调解转录-翻译合的机制.
- 将RfaH合TTC的结构和功能方面与涉及NusG的TTC进行比较.
主要方法:
- 低温电子显微镜 (cryo-EM) 用于在TTC中可视化Escherichia coli RfaH.
- 结构分析的重点是RfaH,RNAP和核糖体之间的相互作用.
- 对RfaH和NusG结合的TTC进行比较,以评估灵活性和组织方面的差异.
主要成果:
- 低温-EM结构显示RfaH通过其N端和C端域分别桥接RNAP和核糖体.
- 与NusG结合的TTC相比,与RfaH结合的TTC由于链接器的灵活性而表现出更受限制的RNAP-核糖体定位.
- 与RfaH合的TTC的结构组织在作战地点的"装载"和"装载"状态中是一致的.
结论:
- 该研究定义了RfaH介导的转录-翻译合的结构基础.
- RfaH的独特结构特征决定了RNAP和核糖体之间的更受约束的相互作用.
- 这些发现为了解RfaH在翻译启动和基因调节中的作用提供了基础.
相关概念视频
Initiation of Translation
32.1K
Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
32.1K
Bacterial RNA Polymerase
29.4K
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
29.4K
Bacterial Transcription
28.1K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.1K
Transcription Initiation
16.3K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.3K
Transcription Attenuation in Prokaryotes
15.2K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
15.2K
Ribosomal RNA Synthesis
13.2K
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
13.2K

