一个世纪的草本基因组时间线预测了植物对气候变化的胃反应
Patricia L M Lang1,2,3, Joel M Erberich4, Lua Lopez5,6
1Department of Biology, Stanford University, Stanford, CA, USA. patricialmlang@gmail.com.
Nature ecology & evolution
|August 8, 2024
概括
由于气候变化,植物口腔密度正在下降,这是由遗传适应驱动的. 历史基因组学揭示了Arabidopsis thaliana口腔发育基因的进化变化,将遗传变异与环境变化联系起来.
科学领域:
- 植物生物学 植物生物学
- 进化遗传学的进化遗传学
- 适应气候变化 适应气候变化
背景情况:
- 对于植物气体交换至关重要的口腔,随着二氧化碳水平的上升,密度正在下降.
- 这种趋势背后的遗传基础和进化适应在很大程度上仍未被探索.
研究的目的:
- 为了研究193年来Arabidopsis thaliana口腔发育的遗传变异和进化适应.
- 将历史基因组数据与气候变化和口腔发育的功能知识联系起来.
主要方法:
- 对跨越193年的191个历史阿拉比多普西斯·塔利亚纳草本馆标本的分析.
- 对43个参与口腔发育的基因进行基因组测序和分析.
- 基于基因淘汰效应的功能评分的开发.
主要成果:
- 关键的口腔发育转录因子 (SPCH,MUTE,FAMA) 在进化上受到限制.
- 几种口腔发育调节剂在当代样本中显示了局部适应.
- 一种功能性得分方法证实了对牙密度历史下降的遗传贡献.
结论:
- 植物对气候变化的反应,特别是口腔密度的变化,具有遗传和进化基础.
- 历史基因组学与功能数据相结合,提供了一种强大的方法来研究植物过去的适应性进化.
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