组合性调节状态在胚胎发生过程中定义了细胞命运多样性
Jonathan E Valencia1, Isabelle S Peter2
1Division of Biology and Biological Engineering, MC156-29, California Institute of Technology, Pasadena, CA, 91125, USA.
Nature communications
|August 9, 2024
概括
这项研究绘制了海刺发育期间的200多个转录因子,揭示了基因调控网络如何确定70多个细胞命运. 这些发现澄清了动物胚胎发生和细胞命运决定的分子基础.
科学领域:
- 发展生物学 发展生物学
- 基因组学就是基因组学.
- 系统生物学 系统生物学
背景情况:
- 细胞命运的规范对于动物的身体计划形成至关重要.
- 基因调节网络 (GRNs) 通过转录因子 (TF) 表达控制细胞命运.
- 在开发过程中了解TF活动是解读GRN状态的关键.
研究的目的:
- 全球评估海发展过程中的空间TF表达.
- 在细胞命运规范过程中确定GRNs的活性和调节状态.
- 建立细胞状态在时间和空间中的分子定义.
主要方法:
- 在海胚胎和幼虫中,表达TFs的空间表达概况为~90%.
- 分析TF组合式表达模式.
- TF状态与细胞命运规范的相关性.
主要成果:
- >200个TF被确定为定义>70个不同的细胞命运.
- 细胞命运特定的调节状态通常涉及15-40个TF.
- 在功能相关的细胞类型中观察到类似的调节状态,无论发育起源如何.
- 调节状态在整个发展过程中表现出持续的时间变化.
结论:
- 组合TF表达为独特的细胞状态规范提供了足够的分子定义.
- 调节电路活动的渐进变化在胚胎发生过程中驱动细胞命运的规范.
- 这项研究提供了TF活动的全面地图,用于在发育过程中定义细胞命运.
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