在药物发现中对虚拟查的当前方法的观点
Ingo Muegge1, Jörg Bentzien1, Yunhui Ge1
1Research department, Alkermes, Inc, Waltham, MA, USA.
Expert opinion on drug discovery
|August 12, 2024
概括
虚拟查 (VS) 是一种强大的药物发现工具,随着机器学习和基于物理的方法的发展. 选择合适的化学空间对于高效的命中识别至关重要,即使是超大图书馆.
科学领域:
- 计算化学是一种计算化学.
- 药物发现 药物发现
- 化学信息学 化学信息学
背景情况:
- 20年来,虚拟查 (VS) 是药物发现的一个关键方法.
- 数十亿种化合物被选,报告了许多成功的VS实例.
- VS方法正在不断进步,包括机器学习和基于物理的技术.
研究的目的:
- 审查近期在药物发现中的VS应用.
- 讨论计算机命中探测实验 (CACHE) 挑战的批判性评估结果.
- 分析成本,开源选项,化学空间覆盖面和VS的图书馆选择.
主要方法:
- 审查最近的虚拟查案例研究.
- 从CACHE挑战中分析未来的发现结果.
- 对VS的成本效益和开源平台的评估.
主要成果:
- 数十亿个分子的超大图书馆 (ULL) 可以使用先进的VS技术进行选.
- 未来的ULL VS活动在各种目标上取得了强大而新的成功.
- 有效的VS通常涉及使用更小的,针对特定目标量身定制的集中式库.
结论:
- 虚拟选最有效的是以适合目的的方式进行,并仔细选择化学空间.
- 虽然ULL选正在推进,但传统的专注图书馆仍然很有价值.
- 需要进一步开发VS方法,以应对更具挑战性的药物目标.
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