IGF2BP1-中介调节CCN1表达通过特定绑定到其3'UTR中的G-四重复结构
Priya Rana1,2, Rajat Ujjainiya1,2, Vishal Bharti1
1CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Biochemistry
|August 12, 2024
概括
这项研究揭示了CCN1mRNA中的G-四重复 (G4) 结构如何与IGF2BP1相互作用,IGF2BP1是一种读取RNA修饰的蛋白质. 这种相互作用调节了CCN1mRNA的稳定性,为基因表达控制提供了新的见解.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 在RNA生物学,RNA生物学.
背景情况:
- 基因表达调节对于复杂的生物来说至关重要,涉及转录和后转录机制.
- mRNA的3'-未翻译区域 (3'UTR) 含有像G-四重复体 (G4s) 这样影响基因表达的调节元素.
- 越来越多的G四重复被认为是mRNA稳定性,翻译和局部化的关键调节者.
研究的目的:
- 为了研究CCN1mRNA的3'UTR中特定的平行G-四重复结构的作用.
- 阐明CCN1 G4结构与胰岛素样生长因子2结合蛋白1 (IGF2BP1) 之间的相互作用.
- 了解RNA修饰,G-四重复结构和转录后基因调节之间的相互作用.
主要方法:
- 研究了人类CCN1mRNA的停止编码子附近保存的G4结构.
- 进行了淘汰和突变发生的实验,以研究基因调节.
- 分析了IGF2BP1和CCN1 G4结构之间的相互作用,包括IGF2BP1的RNA识别动机的作用.
主要成果:
- 在CCN1 3'UTR中确定了一个强大的平行G4结构.
- 证明IGF2BP1特别与G4结构结合.
- 表明IGF2BP1结合调节了CCN1mRNA的稳定性,揭示了一个因触力驱动的相互作用.
结论:
- IGF2BP1通过其RNA识别动机识别并与CCN1 G4结构结合.
- 这种相互作用在调节CCN1mRNA稳定性方面发挥着重要作用.
- 这些发现突出了一个涉及G4结构和RNA结合蛋白在转录后基因调节中的新机制.
相关概念视频
Regulation of Nuclear Protein Sorting
2.4K
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
2.4K
Hedgehog Signaling Pathway
7.3K
The Hedgehog gene (Hh) was first discovered due to its control of the growth of disorganized, hair-like bristles phenotype in Drosophila, much like hedgehog spines. Hh plays a crucial role in the development of organs and the maintenance of homeostasis in both invertebrates and vertebrates. However, while Drosophila has only one Hh protein, mammals have multiple functional Hedgehog proteins - Sonic (Shh), Desert (Dhh), and Indian Hedgehog (Ihh). All of these homologous proteins have adapted to...
7.3K
Cis-regulatory Sequences
9.8K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
9.8K
TGF - β Signaling Pathway
7.3K
The TGF-β signaling pathway regulates cell growth, differentiation, adhesion, motility, and development. TGF-β ligands that induce TGF-β signaling are synthesized in their latent form. Several proteases or cell surface receptors such as integrins act upon the latent form, releasing the active ligand. There are three types of mammalian TGF-βs: (TGF-β1, TGF-β2, and TGF-β3) that bind as homodimers or heterodimers to TGF-β receptors. The TGF-β receptors...
7.3K
Regulation of Expression at Multiple Steps
879
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
879
Regulation of Angiogenesis and Blood Supply
2.5K
Rapidly dividing tumors, embryos, and wounded tissues require more oxygen than usual, lowering the oxygen concentration in the blood. At low oxygen or hypoxic conditions, an oxygen-sensitive transcription factor called the hypoxia-inducible factor 1 or HIF1 is activated. HIF1 is a dimeric protein of alpha (ɑ) and beta (β) subunits. Under optimal oxygen conditions, HIF1β is present in the nucleus while HIF1ɑ remains in the cytosol. HIF1ɑ is hydroxylated by prolyl...
2.5K


