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一种基于口腔微生物组的普遍口腔签名用于牙周炎
Mingyan Geng1,2,3, Min Li3, Yun Li3
1Institution of Medical Artificial Intelligence Binzhou Medical University Yantai China.
iMeta
|August 13, 2024
概括
这项研究确定了与多个国家的健康和疾病相关的关键口腔微生物和代谢生物标志物. 机器学习模型准确地检测到牙周炎,支持元基因组诊断.
科学领域:
- 微生物学 微生物学
- 基因组学就是基因组学.
- 计算生物学 计算生物学
背景情况:
- 牙周炎是一种常见的炎症性疾病,影响口腔健康.
- 了解口腔微生物组在牙周炎中的作用对于诊断和治疗至关重要.
研究的目的:
- 在不同人群中确定牙周炎的强大的微生物和代谢生物标志物.
- 用口腔微生物组数据评估机器学习模型在诊断牙周炎方面的有效性.
主要方法:
- 分析了来自五个国家的八个口腔微生物群元基因组测序队列.
- 识别物种和代谢生物标志物在健康和疾病中持续发生变化.
- 基于分类学概况的机器学习模型的开发和验证.
主要成果:
- 确定了54个物种和26个代谢生物标志物,在队列中持续改变.
- 机器学习模型在区分牙周炎患者方面取得了很高的准确性 (AUC为0.86和0.85).
- 生物标志物和模型证明了跨队列的概括性.
结论:
- 甲基因组数据可以支持牙周炎的诊断.
- 已识别的生物标志物为开发新型诊断和治疗策略提供了基础.
- 跨大陆验证提高了全球口腔健康应用的发现可靠性.
相关概念视频
Introduction to the Human Microbiota
Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity, and disease...
The Skin Microbiota
The human skin serves as a complex ecosystem inhabited by a diverse community of microorganisms, including bacteria, fungi, and viruses. This microbiome plays a critical role in maintaining skin health and defending against pathogenic invaders. The composition of microbial communities varies significantly across different regions of the body, influenced primarily by the local levels of moisture and sebum.Regional Variation in Skin MicrobiotaCutibacterium acnes predominantly colonizes sebaceous...
Microbiome of the Eye
The human eye has a specialized microbiota that reflects its unique anatomical and immunological environment. This low-biomass microbial community predominantly colonizes the conjunctiva and eyelid margins, playing a vital role in ocular surface homeostasis and defense. Despite its proximity to the richly colonized facial skin, the ocular surface maintains a distinct microbial profile due to continuous mechanical and biochemical defense mechanisms.The conjunctival surface hosts fewer microbial...
The Oral Microbiota
The oral microbiome includes a complex ecosystem comprising over 700 microbial species, identified through genomic sequencing and culture-based analyses to date. This community includes a core microbiome, found universally among individuals, and a variable component influenced by environmental factors such as diet, lifestyle, and host genetics. Site-specific conditions, including oxygen gradients, pH levels, and nutrient availability, determine the spatial distribution of these microorganisms...
Development of the Oral Microbiota
The establishment of the oral microbiome begins before birth, challenging the long-held belief that the fetal oral cavity is sterile. The presence of oral microbes such as Streptococcus and Fusobacterium in amniotic fluid suggests that microbial exposure may occur in utero, potentially through translocation from the maternal oral or gastrointestinal tract. This early colonization primes the neonatal immune system and sets the stage for subsequent microbial succession. Maternal health,...
Microbiota of the Respiratory Tract
The human respiratory tract, comprising the upper and lower segments, serves as a critical interface with the external environment. The upper respiratory tract (URT)—including the nostrils, sinuses, pharynx, and oropharynx—is heavily colonized by microbes, while the lower respiratory tract (LRT), composed of the larynx, trachea, bronchi, and lungs, was long thought to be sterile. However, recent molecular studies have revealed that the lungs are not devoid of microbes but act more like...

