Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Cryo-electron Microscopy01:28

Cryo-electron Microscopy

3.3K
Conventional electron microscopy (EM) involves dehydration, fixation, and staining of biological samples, which distorts the native state of biological molecules and results in several artifacts. Also, the high-energy electron beam damages the sample and makes it difficult to obtain high-resolution images. These issues can be addressed using cryo-EM, which uses frozen samples and gentler electron beams. The technique was developed by Jacques Dubochet, Joachim Frank, and Richard Henderson, for...
3.3K
Crystal Field Theory - Octahedral Complexes02:58

Crystal Field Theory - Octahedral Complexes

26.3K
Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
26.3K
Molecular Models02:00

Molecular Models

38.1K
Physical models representing molecular architectures of chemical compounds play essential roles in understanding chemistry. The use of molecular models makes it easier to visualize the structures and shapes of atoms and molecules.
38.1K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

Cryo-EM structures of multiple-peptide resistance factor (MprF) from Pseudomonas aeruginosa.

The FEBS journal·2026
Same author

Somatic hypermutation patterns are shaped by both motif position and sequence grammar.

The EMBO journal·2025
Same author

Distinct filament morphology and membrane tethering features of the dual FtsZ paralogs in Odinarchaeota.

The EMBO journal·2025
Same author

Cryo-EM structures of Mycobacterium tuberculosis imidazole glycerol phosphate dehydratase in the apo state and in the presence of small molecules.

Acta crystallographica. Section F, Structural biology communications·2025
Same author

An Oryza-specific histone H4 variant predisposes H4 lysine 5 acetylation to modulate salt stress responses.

Nature plants·2025
Same author

Molecular determinants of Neu5Ac binding to a tripartite ATP independent periplasmic (TRAP) transporter.

eLife·2025

相关实验视频

Updated: Jun 17, 2025

Author Spotlight: Exploring Cellular Processes by Modeling Ligands in Cryo-EM Maps
09:30

Author Spotlight: Exploring Cellular Processes by Modeling Ligands in Cryo-EM Maps

Published on: July 19, 2024

1.3K

从电子冷显微镜获得的图像中建模干.

Shaileshanand Jha1, Sucharita Bose2, Kutti R Vinothkumar3

  • 1National Centre for Biological Sciences, Tata Institute of Fundamental Research.

Journal of visualized experiments : JoVE
|August 14, 2024
PubMed
概括

低温电子显微镜 (cryoEM) 揭示了蛋白质-连接体相互作用. 本研究探讨了在冷EM地图中识别和建模配体的方法,以帮助药物发现.

科学领域:

  • 结构生物学 结构生物学
  • 生物化学 生物化学
  • 药物发现 药物发现 药物发现

背景情况:

  • 蛋白质-连接体相互作用对于生物过程和药物开发至关重要.
  • 低温电子显微镜 (cryoEM) 提供了近原子分辨率的宏分子结构.
  • 在冷EM数据中识别配体是具有挑战性的,因为地图噪声和分辨率的变化.

研究的目的:

  • 引入软件和方法用于结晶EM中的连接物识别,模型构建和改进.
  • 为了说明连接体检测技术,使用诸如乙醇酶和甲基增生谷氨酸受体mGlu5.5的例子.
  • 分析分辨率对连接体建模的影响,并讨论冷EM在药物发现中的作用.

主要方法:

  • 差异地图生成 (带有和没有连接体的地图减法).
  • Fo-Fc省略了用于连接体验证的地图计算.
  • 使用β-galactosidase在不同分辨率下对联体和溶剂分子建模的分析.

主要成果:

  • 差异图有效地突出显示了一些目标 (例如,enolase) 的连接体存在.
  • 当差异图不够时,Fo-Fc遗漏图提供了一种可靠的方法来验证连接体存在 (例如,mGlu5).
  • CryoEM 地图分辨率显著影响着联结体和溶剂建模的准确性.

更多相关视频

Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

9.7K
Single Particle Cryo-Electron Microscopy: From Sample to Structure
11:52

Single Particle Cryo-Electron Microscopy: From Sample to Structure

Published on: May 29, 2021

8.4K

相关实验视频

Last Updated: Jun 17, 2025

Author Spotlight: Exploring Cellular Processes by Modeling Ligands in Cryo-EM Maps
09:30

Author Spotlight: Exploring Cellular Processes by Modeling Ligands in Cryo-EM Maps

Published on: July 19, 2024

1.3K
Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

9.7K
Single Particle Cryo-Electron Microscopy: From Sample to Structure
11:52

Single Particle Cryo-Electron Microscopy: From Sample to Structure

Published on: May 29, 2021

8.4K

结论:

  • 各种计算方法有助于在冷EM图中识别和建模配体.
  • 在冷EM研究中,Fo-Fc遗漏图为配体验证提供了可靠的方法.
  • 化EM是一种强大的工具,具有显著的潜力,可以通过对蛋白质连接体复合体的详细结构分析来加速药物发现.