零售肉中高Campylobacter多样性:在目前的采样方法中,可能会错过流行病学重要菌株
Agata H Dziegiel1, Samuel J Bloomfield1, George M Savva2
1Microbes and Food Safety, Quadram Institute Bioscience, Norwich, UK.
Epidemiology and infection
|August 21, 2024
概括
检测坎皮洛巴克特疫情需要测试来自肉等食物来源的多个分离物. 目前的方法往往错过了各种菌株,低估了感染风险,并阻碍了对胃肠炎的准确来源归因.
科学领域:
- 食品安全微生物学 食品安全微生物学
- 细菌病原体监测 细菌病原体监测
- 基因组流行病学基因组流行病学
背景情况:
- 坎比洛巴克特菌种是细菌性胃肠炎的主要原因,感染报告不足,疫情负担低估.
- 目前的测试策略,通常每样本使用单个分离物,可能会错过在肉等来源中发现的高多样性坎皮洛巴克特,影响疫情调查.
研究的目的:
- 评估坎皮洛巴克特序列类型 (ST) 多样性对疫情检测的影响.
- 确定最佳培养方法和隔离数量,以从零售样本中全面恢复坎皮洛巴克特菌.
主要方法:
- 从英国诺维奇收集了45个零售样本.
- 使用多种培养方法组合来检测和测序坎皮洛巴克特,每样选择多达48个分离物.
- 进行了重新抽样模拟,以评估ST多样性对疫情检测的影响.
主要成果:
- 从87%的样本中检测到坎皮洛巴克特菌,其中33%的样本含有多种物种.
- 阳性样本包含1-8个序列类型 (ST).
- 模拟表明,每样本最多需要87个隔离物来检测95%的观察到的ST多样性,26个隔离物为95%的检测理论ST爆发的概率.
结论:
- 优化培养方法和对每个样本的多个分离物的分析对于彻底的Campylobacter恢复至关重要.
- 增强的恢复支持更准确的疫情调查和胃肠炎病例的来源归因.
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