在先进的HIV感染中,SARS-CoV-2的宿主内部快速多样化和演变
Sung Hee Ko1, Pierce Radecki1, Frida Belinky1
1Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Nature communications
|August 22, 2024
概括
在晚期艾滋病毒感染者中,SARS-CoV-2在个体内表现出显著的遗传多样性,导致了快速的进化. 这种宿主内部的进化可能会推动新的COVID-19变种的出现.
科学领域:
- 病毒学 病毒学
- 免疫学 免疫学 免疫学
- 遗传学 是一个遗传学.
背景情况:
- 免疫功能低下个体的持续性SARS-CoV-2感染与变体演变有关.
- 驱动这种现象的潜在机制仍然不清楚.
研究的目的:
- 调查艾滋病毒感染者和未感染者的SARS-CoV-2遗传多样性.
- 探索艾滋病毒状况,CD4 T细胞计数和病毒演变之间的关系.
主要方法:
- 高通量,单基因组放大和测序 (HT-SGS) 的SARS-CoV-2尖峰基因.
- 分析来自艾滋病毒感染者 (PWH) 和没有艾滋病毒感染者 (PWOH) 的样本.
主要成果:
- 晚期艾滋病毒感染者 (CD4 < 200 细胞/μL) 平均每人出现 46 个不同的尖端突变组,与 CD4 计数较高的 PWOH 和 PWH 不同.
- 在PWH中,在COVID-19症状发作后的早期观察到增加的宿主内部尖端多样性,并预测了流产时间.
- 纵向分析显示了快速的序列波动,哈普洛型替代和功能重要残留物的积极选择.
结论:
- 先进的艾滋病毒感染与显著的宿主内SARS-CoV-2遗传多样性有关.
- 在PWH中适应性宿主内进化可能有助于出现新的SARS-CoV-2变异.
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