相关实验视频
Updated: Jun 15, 2025

11:00
Determination of the Gas-phase Acidities of Oligopeptides
Published on: June 24, 2013
11.1K
CPred:在电喷离子电离中对改性和未改性的电荷状态预测
Frédérique Vilenne1,2, Annelies Agten1, Simon Appeltans1
1Data Science Institute, Hasselt University, Hasselt, Limburg BE 3500, Belgium.
Analytical chemistry
|August 27, 2024
概括
新型神经网络CPred能够准确地预测用于质谱的电荷状态分布. 该工具通过改进电荷状态预测来提高的识别信心,这对于分析修饰和未修饰至关重要.
科学领域:
- 蛋白质组学是指蛋白质组学.
- 分析化学 分析化学
- 计算生物学 计算生物学
背景情况:
- 质谱对于的识别至关重要,因为它依赖于质量与电荷的比率.
- 质电荷状态的确定是复杂的,特别是在电喷电离的多重电荷离子中.
研究的目的:
- 开发一个神经网络 (CPred) 来准确预测电荷状态分布.
- 通过改进的电荷状态预测,提高对鉴定的信心.
主要方法:
- 开发了CPred,一种神经网络模型.
- 在大规模合成数据上接受过培训,包括三/非三和各种碎片化方法.
- 在使用皮尔森相关系数的独立测试数据集上评估CPred.
主要成果:
- CPred准确地预测了修饰和未修饰的电荷状态分布 (+1到+7).
- 在预测和获得的电荷状态分布之间实现了高相关性 (高达0.9997117).
- 确定了在质子亲缘关系中修饰和性质的重要性.
结论:
- CPred提供准确的电荷状态分布预测,大大帮助的识别.
- 模型能够结合修改,提高其预测能力的能力.
- CPred 作为一个有价值的新功能,用于在质谱学中重新记录的识别.
相关概念视频
Electrospray Ionization (ESI) Mass Spectrometry
753
Higher molecular weight biomolecules are nonvolatile compounds that may decompose before ionizing or vaporizing during mass analysis with conventional electron impact ionization methods. Accordingly, electrospray ionization (ESI) is the favored method for vaporizing and ionizing biomolecules as it circumvents rapid fragmentation and enables the recording of mass signals for the entire biomolecule.
ESI utilizes electrical energy to transfer ions from the liquid phase of the sample into the...
ESI utilizes electrical energy to transfer ions from the liquid phase of the sample into the...
753
Peptide Identification Using Tandem Mass Spectrometry
6.4K
Tandem mass spectrometry, also known as MS/MS or MS2, is an analytical technique that employs two mass analyzers. Essentially it is a series of mass spectrometers that helps isolate a particular biomolecule and then helps study its chemical properties.
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
6.4K
Chemical Ionization (CI) Mass Spectrometry
710
The molecular ion peak of a molecule in the mass spectrum provides vital information for molecular identification. However, conventional electron impact ionization can lead to the rapid dissociation of some molecular ions before they reach the detector. A milder ionization method is required to increase the lifetime of such ionized analyte molecules. Chemical ionization (CI) is a gas-phase protonation reaction useful for mass-analyzing analyte molecules that are easily protonated to yield the...
710

