狗类帕沃病毒的全基因组序列分析显示,在印度各地被一种新型CPV-2c菌株取代
Harish Reddy1, Mouttou Vivek Srinivas2, Jayalakshmi Vasu1
1Department of Veterinary Microbiology, Rajiv Gandhi Institute of Veterinary Education & Research, Puducherry, 605 009, India.
Archives of virology
|August 27, 2024
概括
狗类帕维病毒 (CPV) CPV-2c变种,在VP2中具有Q370R突变,已经在印度取代了CPV-2a. 新的CPV-2c变种显示出可能影响疫苗疗效的突变.
科学领域:
- 兽医病毒学 兽医病毒学
- 分子进化分子进化
- 狗的传染病 狗的传染病
背景情况:
- 狗类帕沃病毒 (CPV) 在狗,特别是小狗中引起严重的胃肠炎.
- 脊髓炎病毒是从猫类泛白血病病毒进化而来的,随后由于VP2蛋白中的突变而出现了CPV-2等变种.
- 研究主要集中在VP2基因上,对非结构性蛋白质 (NS1,NS2) 的关注较少.
研究的目的:
- 分析2009年至2023年期间印度CPV菌株的遗传演变.
- 为了比较最近的印度CPV分离与以前的菌株和当前的疫苗菌株.
- 识别CPV中的新突变和进化动态,包括非结构基因.
主要方法:
- 来自印度 (2023) 的临床CPV样本和历史隔离物 (2009-2019) 的基因组测序.
- 对CPV基因组序列的比较分析,包括VP1,VP2,NS1和NS2基因.
- 遗传学分析和积极选择地点的识别.
- 进行VP2表位分析以预测对抗原性的潜在影响.
主要成果:
- 在印度,CPV-2c (N426E) 变异在很大程度上取代了CPV-2a (N426) 变异.
- 在VP2中Q370R突变在最近的CPV-2c菌株 ("CPV-2c 370Arg变种") 中普遍存在.
- 遗传学分析揭示了CPV-2c菌株的三个分类;在VP1,VP2,NS1和NS2基因中发现了新的阳性选择部位.
- VP2表位分析表明B细胞表位的潜在变化,可能会影响疫苗的有效性.
结论:
- CPV-2c 370Arg变种是印度的主导菌株,与疫苗菌株和早期隔离物不同.
- 新出现的CPV-2c变种由于已识别的突变而具有改变的抗原和复制特性.
- 需要进一步的研究来了解推动CPV传播和潜在的疫苗逃避的进化动态和遗传突变.
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