揭开罗塔病毒A VP6的聚合倾向,表达为通过in silico预测中的大肠杆菌包容体
Pooja Rani Kuri1, Pranab Goswami2
1Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
Scientific reports
|September 13, 2024
概括
罗塔病毒VP6蛋白在细菌表达过程中形成包容体. 确定容易聚合的区域有助于为疫苗开发设计可溶性VP6变体.
科学领域:
- 病毒学 病毒学
- 蛋白质生物化学 蛋白质生物化学
- 疫苗开发 疫苗开发
背景情况:
- 罗塔病毒内囊蛋白VP6是下一代疫苗的关键目标,因为它的丰富性和保存性.
- Prokaryotic VP6 的表达通常会导致包含体,阻碍研究和疫苗应用.
研究的目的:
- 研究 prokaryotic VP6 表达过程中包容体的形成.
- 在轮状病毒VP6.6中识别和描述聚合倾向区域 (APR).
主要方法:
- 在大肠杆菌中异构重组VP6表达.
- 传输电子显微镜和蒂奥夫拉T测定用于实验分析.
- 多个基于序列和基于结构的计算工具用于APR预测.
主要成果:
- 观察到VP6的纳入物体是无形聚合物.
- 聚合取决于化温度.
- 通过计算确定了24个共识APR,其中21个是表面暴露的,主要是疏水的.
结论:
- 计算APR识别支持VP6聚合的实验发现.
- 了解VP6聚合倾向对于改善 prokaryotic 表达至关重要.
- 这项研究为设计可溶性VP6变体铺平了道路,推进了轮状病毒研究,病理学,治疗和诊断.
相关概念视频
Viral Recombination
22.1K
Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.
22.1K
Leaky Scanning
4.5K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R...
4.5K
Rous Sarcoma Virus (RSV) and Cancer
5.2K
Rous Sarcoma virus or RSV was discovered by F. Peyton Rous in the year 1911 as a filterable transmissible agent that could cause tumors in chickens. He won a Nobel Prize for this discovery in 1966. His experiments clearly demonstrated that some cancers could be caused by infectious agents and led to the discovery of many more cancer-causing viruses in animals as well as humans.
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
5.2K
Size and Structure of Viral Genomes
1.2K
Viral genomes exhibit remarkable diversity in size, structure, and composition, influencing their replication strategies and interactions with host cells. These genomes consist of either DNA or RNA and may be linear or circular. Additionally, they can be single-stranded or double-stranded, with each configuration affecting how the virus propagates within a host. RNA viruses, for instance, generally have smaller genomes than DNA viruses, a factor that contributes to their high mutation rates and...
1.2K
Viruses with RNA Genomes
1.5K
RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
1.5K
Human Virome
45
The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible...
45


