Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Riboswitches01:56

Riboswitches

8.1K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.1K
Synthetic Biology02:55

Synthetic Biology

4.7K
Synthetic biology is an interdisciplinary science that involves using principles from disciplines such as engineering, molecular biology, cell biology, and systems biology. It involves remodeling existing organisms from nature or constructing completely new synthetic organisms for applications such as protein or enzyme production, bioremediation, value-added macromolecule production, and the addition of desirable traits to crops, to name a few.
Golden rice
Golden rice is a genetically modified...
4.7K
PI Controller: Design01:24

PI Controller: Design

222
Proportional Integral (PI) controllers are a fundamental component in modern control systems, widely used to enhance performance and mitigate steady-state errors. They are particularly effective in applications such as automatic brightness adjustment on smartphones, where they excel at mitigating steady-state errors for step-function inputs. Unlike PD controllers, which require time-varying errors to function optimally, PI controllers leverage their integral component to address residual...
222
Ribozymes02:47

Ribozymes

11.2K
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can...
11.2K
PD Controller: Design01:26

PD Controller: Design

199
In automotive engineering, car suspension systems often employ Proportional Derivative (PD) controllers to enhance performance. PD controllers are utilized to adjust the damping force in response to road conditions. A controller, acting as an amplifier with a constant gain, demonstrates proportional control, with output directly mirroring input.
Designing a continuous-data controller requires selecting and linking components like adders and integrators, which are fundamental in Proportional,...
199
Switching of BJT01:22

Switching of BJT

368
Switching behavior in Bipolar Junction Transistors (BJTs) is a fundamental aspect utilized in various electronic circuits, particularly for digital logic applications like switches and amplifiers. In a typical switching circuit, a BJT alternates between cut-off and saturation modes, corresponding to the "off" and "on" states, respectively, thus behaving like an ideal switch.
Cut-off Mode ("Off" State): In this state, both the emitter-base and collector-base junctions are...
368

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

StraD: a coarse-grained simulation of co-transcriptional RNA folding.

NAR genomics and bioinformatics·2025
Same author

In Silico Design of Interacting RNA Sequences Using the MODENA Web Server.

Methods in molecular biology (Clifton, N.J.)·2025
Same author

Frequency of cytosine methylation in the adjacent regions of soybean retrotransposon <i>SORE-1</i> depends on chromosomal location.

Genome·2023
Same author

A Web Server for Designing Molecular Switches Composed of Two Interacting RNAs.

International journal of molecular sciences·2021
Same author

Effects of Host-Adaptive Mutations on Hop Stunt Viroid Pathogenicity and Small RNA Biogenesis.

International journal of molecular sciences·2020
Same author

COSMO: A dynamic programming algorithm for multicriteria codon optimization.

Computational and structural biotechnology journal·2020

相关实验视频

Updated: Jun 12, 2025

Design to Implementation Study for Development and Patient Validation of Paper-Based Toehold Switch Diagnostics
10:42

Design to Implementation Study for Development and Patient Validation of Paper-Based Toehold Switch Diagnostics

Published on: June 17, 2022

2.8K

使用MODENA进行Riboswitch设计

Akito Taneda1

  • 1Graduate School of Science and Technology, Hirosaki University, Hirosaki, Aomori, Japan. taneda@hirosaki-u.ac.jp.

Methods in molecular biology (Clifton, N.J.)
|September 23, 2024
PubMed
概括

设计人造的 ribowitches 计算加速发现. 现代网络服务器使用多目标遗传算法和RNA结构预测来创建ON 核糖开关,与实验方法相比节省时间.

科学领域:

  • 计算生物学是一种计算生物学.
  • 合成生物学 合成生物学
  • RNA生物学的RNA生物学

背景情况:

  • 设计人工核糖突变器是复杂和耗时的.
  • 实验方法,如体外选择是缓慢的.
  • 计算工具可以加快riboswitch设计过程.

研究的目的:

  • 描述使用MODENA网络服务器来设计人造riboswitch的方法.
  • 展示一种计算方法来加快在线光缆开关的设计.
  • 介绍一种整合多目标遗传算法和RNA二次结构预测的方法.

主要方法:

  • 使用MODENA网络服务器进行in silico设计.
  • 采用多目标遗传算法进行优化.
  • 将RNA二次结构预测纳入设计工作流程中.

主要成果:

  • 通过使用MODENA网络服务器成功设计了ON riboswitch.
  • 演示了人工 рибо开关的计算设计的可行性.
  • 展示了遗传算法和结构预测的整合.

结论:

关键词:
能源屏障是一种能源屏障.多目标遗传算法 多目标遗传算法二级结构是次要结构.合成RNA是一种合成RNA.网络服务器的Web服务器.

更多相关视频

Design and Synthesis of a Reconfigurable DNA Accordion Rack
07:44

Design and Synthesis of a Reconfigurable DNA Accordion Rack

Published on: August 15, 2018

7.0K
Designing a Bio-responsive Robot from DNA Origami
13:32

Designing a Bio-responsive Robot from DNA Origami

Published on: July 8, 2013

22.2K

相关实验视频

Last Updated: Jun 12, 2025

Design to Implementation Study for Development and Patient Validation of Paper-Based Toehold Switch Diagnostics
10:42

Design to Implementation Study for Development and Patient Validation of Paper-Based Toehold Switch Diagnostics

Published on: June 17, 2022

2.8K
Design and Synthesis of a Reconfigurable DNA Accordion Rack
07:44

Design and Synthesis of a Reconfigurable DNA Accordion Rack

Published on: August 15, 2018

7.0K
Designing a Bio-responsive Robot from DNA Origami
13:32

Designing a Bio-responsive Robot from DNA Origami

Published on: July 8, 2013

22.2K
  • 现代网络服务器提供了一种高效的计算工具,用于设计人造的ON riboswitches.
  • 在形设计加速了功能性 рибо开关的发展.
  • 这种方法为传统的实验方法提供了有价值的替代方案.