转录垃圾:废物还是各种生物过程中的关键调节器?
Anwesha Anyatama1, Tapasya Datta1, Shambhavi Dwivedi1
1CSIR- Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP) P.O. CIMAP, Near Kukrail Picnic Spot, Lucknow, 226 015, India.
Current opinion in plant biology
|September 27, 2024
概括
植物基因组含有"转录垃圾",如非编码RNA,对于调节植物生长,发育和应激反应至关重要. 这些区域还产生小蛋白质,调节基因表达和染色质重塑.
科学领域:
- 植物分子生物学 植物分子生物学
- 基因组学就是基因组学.
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 植物基因组拥有大量的非编码DNA,在历史上被称为"垃圾DNA".
- 这些区域的RNA转录,称为"转录垃圾",包括非编码RNA,UTR和sORF.
- 新出现的证据凸显了这些以前被忽视的基因组元素的监管功能.
研究的目的:
- 审查植物"转录垃圾"在基因调节中的关键作用.
- 巩固对这些区域如何影响植物生理学的理解.
- 突出植物中非编码RNA和小蛋白质的功能意义.
主要方法:
- 关于植物非编码DNA和RNA的最新研究的文献综述.
- 对研究UTRs,sORFs和小的基因调节的分析.
- 对染色体重塑和基因表达调制的研究结果的综合.
主要成果:
- "转录垃圾"积极调节植物生长,发育和荷尔蒙平衡.
- 非编码RNA分子和短开放的读取是关键的监管组件.
- 来自这些区域的小蛋白质,包括miPEPs和miPs,通过染色体重塑来调节基因表达.
结论:
- "转录垃圾"的概念已经过时了;这些区域对于植物生物学来说至关重要.
- 了解这些监管要素对于推进植物科学和农业至关重要.
- 对小蛋白和非编码RNA的进一步研究将为植物适应性和弹性提供新的见解.
相关概念视频
Transcription
20.6K
Transcription is the synthesis of RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in correctly synthesizing messenger RNA (mRNA). Transcriptional regulation is responsible for the differentiation of different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
20.6K
Regulation of Expression at Multiple Steps
875
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
875
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K
General Transcription Factors
5.2K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.2K
Organization of Genes
68.5K
Overview
68.5K
lncRNA - Long Non-coding RNAs
8.5K
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
8.5K


