相关实验视频
Updated: Jun 11, 2025

12:29
mRNA Interactome Capture from Plant Protoplasts
Published on: July 28, 2017
9.1K
在体内和体外了解物种特异性和保存的RNA-蛋白相互作用
Sarah E Harris1,2, Maria S Alexis3,4, Gilbert Giri2,5
1Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, USA.
Nature communications
|September 27, 2024
概括
像那些涉及Unkempt (UNK) 蛋白质的RNA-蛋白质相互作用,显示出显著的物种特异性差异. 即使保留了结合点,也会产生微妙的序列变异,影响基因调节.
科学领域:
- 分子生物学分子生物学
- 进化生物学 进化生物学
- 遗传学 遗传学 是一个
背景情况:
- 基因表达是由DNA,蛋白质和RNA调节的.
- 基于RNA的调控在基因表达和蛋白质序列进化中起着至关重要的作用.
- 保存的神经元RNA结合蛋白Unkempt (UNK) 是研究RNA-蛋白相互作用的模型.
研究的目的:
- 通过使用UNK蛋白来研究RNA-蛋白相互作用的物种间差异.
- 了解UNK-RNA相互作用的生物化学基础及其进化影响.
主要方法:
- 人与小鼠之间的mRNA结合的比较分析.
- 高通量生物化学测定用于重构人类和小鼠UNK-RNA相互作用体.
- 对序列图案和结合强度的分析.
主要成果:
- 大约50%的人类mRNA点在小鼠中也被UNK结合.
- 即使在保存的转录级绑定中也观察到差异化动机使用.
- 在体外测试中总结了体内结合模式.
- 高度保存的结合点表现出更强的结合,与下游调节相关.
- 围绕图案的微妙序列变化被确定为特定物种结合的关键驱动因素.
结论:
- 蛋白质-RNA相互作用是复杂的,由多个特征驱动.
- 进化塑造了RNA结合蛋白相互作用,从而赋予了特定物种的基因调节.
- 了解这些相互作用对于破译基因表达进化至关重要.
相关概念视频
Types of RNA
63.3K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
63.3K
RNA Interference
26.0K
RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
26.0K
Protein-protein Interfaces
12.5K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
12.5K
RNA Stability
33.3K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
33.3K
Nucleic Acids
43.9K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
43.9K
siRNA - Small Interfering RNAs
16.6K
Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
16.6K

