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相关概念视频

Transfer RNA Synthesis02:36

Transfer RNA Synthesis

11.9K
One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
11.9K
RNA Editing02:23

RNA Editing

8.9K
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
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Ribosome Profiling02:24

Ribosome Profiling

3.5K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.5K
Riboswitches01:56

Riboswitches

8.1K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.1K

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相关实验视频

Updated: Jun 10, 2025

A Rapid High-throughput Method for Mapping Ribonucleoproteins RNPs on Human pre-mRNA
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A Rapid High-throughput Method for Mapping Ribonucleoproteins RNPs on Human pre-mRNA

Published on: December 2, 2009

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一个基于RT的RNA修改映射的用户指南.

Dorthy Fang1, John M Babich1, Emily A Dangelmaier1

  • 1Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, United States.

Methods in enzymology
|October 10, 2024
PubMed
概括

本研究详细介绍了使用马拉松RT来通过反转录序测绘RNA修饰的最佳实践. 这些指导方针改善了对修饰的检测,即使是罕见的修饰,以更好地理解生物.

科学领域:

  • 生物化学 生化学
  • 分子生物学分子生物学
  • 基因组学就是基因组学.

背景情况:

  • 对RNA核酸的化学修饰在生物调节和合成治疗应用中起着至关重要的作用.
  • 精确检测RNA修饰,包括它们的流行率和静脉测量,对于理解它们的功能至关重要.
  • 现有的方法在区分类似的修改和检测低丰度的方法方面面临挑战.

研究的目的:

  • 为利用马拉松RT酶在基于逆转录的RNA修饰测序中提供准则和最佳实践.
  • 为了实现强大的实验规划,在单核酸分辨率下绘制RNA修饰图.
  • 为了解决以往基于逆转录的技术的局限性.

主要方法:

  • 应用高度处理性的马拉松RT酶用于逆转录.
  • 开发测序策略来检测修改签名.
  • 建立用于实验验证的控制和协议.

主要成果:

  • 马拉松RT在基于逆转录的修饰测序中的实用性的演示.
  • 改善检测RNA修饰的指导方针,包括罕见或低静态度的物种.
  • 实验方案和控制建议的介绍.
关键词:
副转录ome 副转录ome 副转录ome 副转录ome基因组RNA的修改 基因组RNA的改变有关RNA测序的RNA测序反向转录是一种反向转录.

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Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions
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Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions

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2D-HELS MS Seq: A General LC-MS-Based Method for Direct and de novo Sequencing of RNA Mixtures with Different Nucleotide Modifications
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2D-HELS MS Seq: A General LC-MS-Based Method for Direct and de novo Sequencing of RNA Mixtures with Different Nucleotide Modifications

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相关实验视频

Last Updated: Jun 10, 2025

A Rapid High-throughput Method for Mapping Ribonucleoproteins RNPs on Human pre-mRNA
13:00

A Rapid High-throughput Method for Mapping Ribonucleoproteins RNPs on Human pre-mRNA

Published on: December 2, 2009

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Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions
10:52

Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions

Published on: September 28, 2017

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2D-HELS MS Seq: A General LC-MS-Based Method for Direct and de novo Sequencing of RNA Mixtures with Different Nucleotide Modifications
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2D-HELS MS Seq: A General LC-MS-Based Method for Direct and de novo Sequencing of RNA Mixtures with Different Nucleotide Modifications

Published on: July 10, 2020

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结论:

  • 马拉松RT酶为基于测序的RNA修饰映射提供了一个强大的方法.
  • 遵守提出的指南可以提高修改检测的可靠性和准确性.
  • 这项工作有助于更深入地了解RNA修饰在生物系统和治疗中的作用.