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An important concept in studying metabolism and energy is that of chemical equilibrium. Most chemical reactions are reversible. They can proceed in both directions, releasing energy into their environment in one direction, and absorbing it from the environment in the other direction. The same is true for the chemical reactions involved in cell metabolism, such as the breaking down and building up of proteins into and from individual amino acids, respectively. Reactants within a closed system...
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Most vertebrate cells grow in vitro attached to a substrate as a monolayer, called adherent cultures. The flasks and plates used to grow cells are chemically treated to facilitate cell attachment. However, a few cell types, such as hematopoietic cells, can grow in a suspension. In contrast to adherent cultures, suspension cultures can grow in non-treated cultureware using magnetic stirrers or spinner flasks to agitate the culture media
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如何用人工智能构建虚拟细胞:优先事项和机会

Charlotte Bunne1,2,3,4, Yusuf Roohani1,3,5, Yanay Rosen1,3

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人工智能 (AI) 可以创建虚拟细胞,从生物数据中学习的高保真模拟. 这些AI虚拟细胞将促进对细胞生物学和疾病机制的理解.

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科学领域:

  • 细胞生物学 细胞生物学
  • 计算生物学是一种计算生物学.
  • 医学中的人工智能

背景情况:

  • 细胞是生命和疾病研究的基础.
  • 准确的细胞建模对于生物学理解和识别疾病起源至关重要.
  • 人工智能的进步和大规模数据生成为细胞建模提供了新的途径.

研究的目的:

  • 提出利用人工智能来构建虚拟细胞的愿景.
  • 概述AI虚拟细胞用于模拟蜂系统的功能.
  • 为实现这一愿景应对挑战和要求.

主要方法:

  • 利用人工智能 (AI) 的进步.
  • 从大规模,多层次的生物数据中学习.
  • 使用虚拟仪器开发可解释的in silico实验.

主要成果:

  • 人工智能虚拟细胞可以生成通用生物表征.
  • 促进可解释的in silico实验来预测细胞行为.
  • 确定包括数据需求,评估和社区标准在内的挑战.

结论:

  • 人工智能虚拟细胞为预测细胞机制提供了一条通往预测性理解的道路.
  • 潜在的应用包括药物标识和预测细胞反应.
  • 开放科学合作是实现AI虚拟细胞实用性的关键.