适应性实验室进化招募了酸半化脱酶的杂乱性,以修复不同的代谢缺陷
Hai He1, Paul A Gómez-Coronado2, Jan Zarzycki2
1Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany. hai.he@mpi-marburg.mpg.de.
Nature communications
|October 15, 2024
概括
酶杂乱使得一个单一的酶,如大肠杆菌的酸半化脱酶 (Sad),能够发展出新的功能. 这项研究表明,SAD通过各种进化途径独立支持维生素生物合成和糖解.
科学领域:
- 生物化学 生物化学
- 进化生物学 进化生物学
- 微生物学 微生物学
背景情况:
- 酶乱交是新功能进化的关键驱动力.
- 对于一个酶的杂乱性被反复利用为不同的进化目的的能力还不太清楚.
研究的目的:
- 为了研究从大肠杆菌中获得的杂交性酶酸半化脱酶 (Sad) 如何独立地被招募用于不同的代谢作用.
- 探索使这些功能转变成为可能的进化机制和活性部位可塑性.
主要方法:
- 适应性实验室进化 (ALE) 用于进化大肠杆菌菌株.
- 进行了遗传和生化分析,以描述酶功能和进化轨迹.
主要成果:
- 证实SAD可以替代红-4-酸脱酶在氧醇5'-酸盐 (PLP) 生物合成中.
- 萨德还在糖溶解中取代了甘甲3-酸盐脱酶.
- 进化招募涉及活性位子突变,基因拷贝数放大和改变基因表达.
结论:
- 乱交的酶SAD表现出显著的活性位体可塑性,使其能够独立地用于不同的代谢功能.
- 这突显了看似普通的酶作为进化创新的储存库的潜力.
- 这项研究揭示了氨基酸代谢和酶进化中的新型调节联系.
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