酸化调节了染色质重塑剂SMARCAD1在核细胞结合,ATP水解和基因素交换中的作用
Briana L Aboulache1, Nicole M Hoitsma1, Karolin Luger1
1Department of Biochemistry, University of Colorado Boulder, Boulder, Colorado, USA; Howard Hughes Medical Institute, Chevy Chase, Maryland, USA.
The Journal of biological chemistry
|October 18, 2024
概括
作为染色体重塑剂的SMARCAD1的酸化会影响其DNA结合和基因素交换活动. 它的N端区域对于核细胞组合和基因子交换至关重要,揭示了复杂的调节机制.
科学领域:
- 分子生物学分子生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 染色体动力学 染色体动力学
背景情况:
- 染色体结构的维护对于DNA模板过程如转录和修复至关重要.
- 基因组辅导体和依赖ATP的重塑剂调节核细胞的动力学.
- SMARCAD1是一种独特的重塑器,具有质子交换和核细胞沉积能力.
研究的目的:
- 研究酸化如何影响SMARCAD1的酶活性.
- 探索SMARCAD1的N终端区域在其功能中的作用.
- 阐明管理SMARCAD1.1的监管机制.
主要方法:
- 突变分析 突变分析
- 生物化学活动测定测定
- 质谱测量质量谱测量
主要成果:
- 酸化显著改变了SMARCAD1与核子体,DNA和H2A-H2B基因组结合的作用.
- 酸化会影响ATP水解和素H2A-H2B交换,但对H3-H4结合和核细胞组合的影响很小.
- SMARCAD1的N终端区域对于核细胞组合和基因子交换至关重要.
结论:
- 酸化是SMARCAD1与色素成分及其酶功能相互作用的关键调节者.
- SMARCAD1的N终端区域在其核细胞组合和基因素交换活动中发挥着关键作用.
- 这项研究提供了关于SMARCAD1在染色体动态中的复杂调节和多样化功能的见解.
相关概念视频
Nucleosome Remodeling
9.0K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
9.0K
Spreading of Chromatin Modifications
8.2K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
Writers
The writer...
8.2K
Histone Modification
13.1K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.1K
Phosphorylation
50.1K
The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
50.1K
Covalently Linked Protein Regulators
6.8K
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
These groups modify specific amino acids in a protein....
6.8K
The Nucleosome Core Particle
882
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
882


