使用DNA-PAINT揭示高密度生物功能化表面的空间分子异质性
Wei Shan Tan1,2, Arthur M de Jong2,3, Menno W J Prins1,2,3,4
1Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5612 AZ, The Netherlands.
ACS applied materials & interfaces
|October 21, 2024
概括
使用单分子DNA-PAINT成像,准确量化生物功能表面的分子密度. 这种方法揭示了生物功能化的固有异质性,这对于可再生的生物科学应用至关重要.
科学领域:
- 表面化学 表面化学
- 生物物理学的生物物理.
- 纳米技术纳米技术
背景情况:
- 控制生物功能表面上的分子密度和分布对于可再生的生物科学功能至关重要.
- 高密度生物功能化 (10^2-10^5分子/μm2) 需要精确的量化方法.
研究的目的:
- 开发和介绍一种分析方法来量化高密度生物功能化表面上的分子密度和空间分布.
- 为生物功能化效率,产量和同质性提供见解.
主要方法:
- 一个分子DNA-PAINT成像.
- 模拟模型对生命周期和空间低采样进行校正.
- 三种不同的分子计数方法和空间分布统计测试.
主要成果:
- 分子密度和空间分布在ssDNA亲和结合剂表面上的量化.
- 展示对生物功能化效率,产量和同质性的洞察力.
- 在生物功能化过程中识别固有的异质性.
结论:
- 开发的方法使得高密度生物功能化表面的快速和准确量化.
- 分析框架揭示了固有的异质性,为分子机制提供了洞察力.
- 使用这种框架进行DNA-PAINT成像是一种多功能工具,用于在各种应用中研究生物功能化的空间异质性.
相关概念视频
Labeling DNA Probes
DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
DNA Microarrays
Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...


