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相关概念视频

Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

11.1K
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
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Next-generation Sequencing03:00

Next-generation Sequencing

87.7K
The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
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Sanger Sequencing01:57

Sanger Sequencing

753.1K
DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
753.1K
RNA-seq03:21

RNA-seq

9.8K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
9.8K
Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

5.7K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
5.7K
Genome Annotation and Assembly03:36

Genome Annotation and Assembly

18.8K
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
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相关实验视频

Updated: Jun 9, 2025

Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy
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Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy

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下一代测序-国际象棋问题

Leo Zeitler1,2, Arach Goldar2, Cyril Denby Wilkes2

  • 1Institut Pasteur, Université Paris Cité, CNRS UMR 3525, INSERM UA12, Comparative Functional Genomics Group, Paris, 75015, France.

NAR genomics and bioinformatics
|October 25, 2024
PubMed
概括

下一代测序 (NGS) 数据分析通常平均细胞种群,但这项研究表明单个细胞动态是至关重要的. 提出了一种新的方法来独立分析每个细胞中的DNA粒子相互作用,以获得准确的时空运动学.

科学领域:

  • 基因组学就是基因组学.
  • 计算生物学 计算生物学
  • 细胞动力学细胞动力学

背景情况:

  • 下一代测序 (NGS) 能够实现全基因组的时空分析.
  • 当前的方法经常插入数据,并假定人口均性.
  • 这种假设可能会误解复杂的细胞动态.

研究的目的:

  • 在NGS数据分析中挑战人口同质性的假设.
  • 提出一种用于分析细胞动态的新方法.
  • 突出基因组研究中单个细胞行为的重要性.

主要方法:

  • 一个思想实验的发展被称为"NGS象棋问题".
  • 时间序列数据分析与叠加的象棋游戏的比较.
  • 时间空间运动学的分析.

主要成果:

  • 证明全人口平均值对于理解细胞过程可能不合适.
  • "NGS国际象棋问题"说明了当前分析模型的局限性.
  • 单个细胞分析对于准确的解释至关重要.

结论:

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High-throughput Identification of Gene Regulatory Sequences Using Next-generation Sequencing of Circular Chromosome Conformation Capture 4C-seq
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High-throughput Identification of Gene Regulatory Sequences Using Next-generation Sequencing of Circular Chromosome Conformation Capture 4C-seq

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Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy

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High-throughput Identification of Gene Regulatory Sequences Using Next-generation Sequencing of Circular Chromosome Conformation Capture 4C-seq
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  • 倡导一种新的方法来独立分析每个细胞内的DNA粒子相互作用.
  • 这种方法即使在同质的细胞群中也是必不可少的.
  • 准确的时空动力学需要细胞特异性分析.