相关实验视频
Updated: Jun 9, 2025

00:08
A Rapid In Vivo Bioassay for Developmentally Active Enhancers
1.3K
维斯塔增强器浏览器:一个更新的组织特异性发育增强剂数据库
Michael Kosicki1, Fotis A Baltoumas2, Guy Kelman1
1Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.
Nucleic acids research
|October 29, 2024
概括
维斯塔增强浏览器现在包含超过4500个转基因测试用于哺乳动物基因调节. 这个更新的数据库有助于研究人类遗传变异和发育生物学.
科学领域:
- 遗传学 遗传学 是一个
- 发展生物学 发展生物学
- 分子生物学分子生物学
背景情况:
- 调控元素,特别是增强剂,是哺乳动物基因表达的关键控制者.
- 增强剂中的遗传变异经常与人类疾病有关.
研究的目的:
- 呈现更新的VISTA增强剂浏览器,一个全面的数据库体内转基因增强剂测试.
- 为各种胚胎发育阶段和物种提供有关增强剂活性的结构化数据.
主要方法:
- 维斯塔增强浏览器数据库得到了显著的扩展,现在包括超过4500个实验和23500张图像.
- 数据包括人类致病性和合成变体的增强剂活性,以及来自不同物种的序列.
- 进行了成千上万个个体实验和数百个等位基因对比的手动策划.
主要成果:
- 该数据库自上次发布以来增长了近20倍,这代表了可用的实验数据的大幅增加.
- 更新后的浏览器提供了关于胚胎发育期间增强器功能的详细信息.
- 它包括有关疾病相关变异的数据和跨物种序列比较.
结论:
- 维斯塔增强器浏览器是了解基因调节和人类遗传变异的宝贵资源.
- 它支持发育生物学研究,提供了关于增强器功能 in vivo 的广泛数据.
- 扩展的数据库有助于研究遗传变异对基因表达和疾病的影响.
相关概念视频
The Eukaryotic Promoter Region
16.2K
The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences. The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
16.2K
Embryonic Connective Tissues
4.2K
During early development, the embryo forms two types of connective tissues— the mesenchyme and mucoid connective tissue.
The mesenchyme is the first connective tissue that emerges in the developing embryo. It consists of loosely arranged multipotent mesenchymal cells and reticular fibers in the extracellular matrix. This loose arrangement allows easy migration of cells, which is essential for germ layer positioning, patterning, and organ morphogenesis during embryonic development.
The mesenchyme is the first connective tissue that emerges in the developing embryo. It consists of loosely arranged multipotent mesenchymal cells and reticular fibers in the extracellular matrix. This loose arrangement allows easy migration of cells, which is essential for germ layer positioning, patterning, and organ morphogenesis during embryonic development.
4.2K
Cell Specific Gene Expression
4.6K
4.6K
Eukaryotic Transcription Activators
10.9K
Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
10.9K
General Transcription Factors
5.2K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.2K
Cadherins in Tissue Organization
2.9K
The cadherins are a superfamily of cell adhesion molecules comprising over 180 variants, with specific tissues expressing a particular combination of cadherin types. Cadherins generally exhibit homophilic binding; i.e., cadherins on one cell bind to cadherins of the same or closely related type on another cell. Thus, cells of the same type have a specific affinity to bind to each other and sort themselves into clusters to form tissues.
Cell Sorting During Development
Cell sorting plays an...
Cell Sorting During Development
Cell sorting plays an...
2.9K

