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相关概念视频

RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

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Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
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Co-activators and Co-repressors02:04

Co-activators and Co-repressors

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Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...
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Transcription Factors02:16

Transcription Factors

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Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
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Eukaryotic Transcription Activators02:42

Eukaryotic Transcription Activators

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Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
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Master Transcription Regulators02:23

Master Transcription Regulators

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Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
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Regulation of Expression Occurs at Multiple Steps02:24

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Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
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相关实验视频

Updated: Jun 9, 2025

Author Spotlight: An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations
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短暂的促进体相互作用调节发育基因激活.

Sylvia Mahara1, Sonja Prüssing1, Valeriia Smialkovska1

  • 1Mechanisms of Genome Control, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, Heidelberg, Germany.

Molecular cell
|October 30, 2024
PubMed
概括
此摘要是机器生成的。

基因激活涉及到3D基因组结构的变化. 这项研究揭示了染色质拓和远端调节元件 (DREs) 的动态变化如何影响细胞分化期间的基因诱导的大小.

关键词:
在Capture-C中使用Capture-C.染色体组织组织 染色体组织远距离的调节元素胚胎干细胞分化的过程基因表达的基因表达方式基因组拓学的基因组.基质子的修改 基质子的修改时间动态的时间动态.

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科学领域:

  • 基因组学就是基因组学.
  • 分子生物学分子生物学
  • 发展生物学 发展生物学

背景情况:

  • 转录诱导与染色质拓变化有关.
  • 基因激活通常涉及促进剂-增强剂相互作用的增加.
  • 在转录过程中这些拓变化的协调仍然不清楚.

研究的目的:

  • 研究3D基因组重组和转录过渡之间的关系.
  • 了解在转录激活过程中染色质拓动态如何在时间和空间上协调.
  • 为了确定与转录诱导的大小相关的明显的拓变化.

主要方法:

  • 结合染色体构成捕获 (3C) 与转录和染色体分析.
  • 利用胚胎干细胞 (ESC) 分化时间课程.
  • 进行遗传删除,以评估远端调节元件 (DREs) 和相互作用的作用.

主要成果:

  • 确定了与转录诱导的大小相关的明显的拓变化.
  • 检测到暂时形成的相互作用对基因调节至关重要.
  • 证明了这些相互作用的形成和破坏,涉及DREs,有助于转录诱导.

结论:

  • 与转录诱导的大小相关的拓动态.
  • 确定了一种新的转录重要远端调节元件 (DREs) 类.
  • 提供了关于在转录激活过程中对3D基因组重组的协调的见解.