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相关概念视频

Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

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Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
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Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

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A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
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Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
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Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

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Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
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Gene Families01:57

Gene Families

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Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
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Gene Duplication and Divergence02:37

Gene Duplication and Divergence

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The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
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相关实验视频

Updated: Jun 8, 2025

A Strategy to Identify de Novo Mutations in Common Disorders such as Autism and Schizophrenia
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人类基因组中的多态伪基因 - - 一个全面的评估.

Mónica Lopes-Marques1, M João Peixoto2, David N Cooper3

  • 1CIIMAR-Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Porto, Portugal. mmarques@ciimar.up.pt.

Human genetics
|November 3, 2024
PubMed
概括

多态伪基因,具有活跃的编码等位基因,影响人类的嗅觉信号,药物代谢和免疫力. 遗传冗余可能会补偿基因失活,为基因组进化提供了洞察力.

关键词:
基因的基本性 基因的基本性基因丢失 基因丢失功能丧失 功能丧失多态形态的伪基.人口分析的人口分析.

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Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
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Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA

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In Vivo Modeling of the Morbid Human Genome using Danio rerio
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In Vivo Modeling of the Morbid Human Genome using Danio rerio

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05:51

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科学领域:

  • 基因组学就是基因组学.
  • 人类遗传学 人类遗传学
  • 人口遗传学 人口遗传学

背景情况:

  • 人类基因组研究越来越多地确定了编码区域的变异.
  • 多态伪基因,具有未固定的非活化突变,代表了一种独特的,研究不足的基因组特征.
  • 这些伪基因含有来自功能丧失 (LoF) 突变的编码和非编码等位基因,存在于不同种群中.

研究的目的:

  • 研究多态伪基因对人类生物系统的影响.
  • 分析人类种群中伪基因中功能丧失 (LoF) 变异的流行率和功能影响.

主要方法:

  • 对232个多态伪基因进行跨种群分析,包括35个新型例子.
  • 转录组和蛋白质组分析以评估在LoF等位基因存在时的基因活性.
  • 对基因家族成员的检查,以探索遗传冗余.

主要成果:

  • 人类的嗅觉信号传递,药物代谢和免疫力受到多态伪基因的显著影响.
  • 在所有分析的种群中,有179个基因显示出多态LoF变体.
  • 具有编码等位基因的基因仍然具有功能,特别是在新陈代谢途径和免疫反应中,尽管它们含有LoF变异.

结论:

  • 多态伪基因为人类基因组架构和基因动态提供了新的见解.
  • 它们的分布和表达突出了基因增加和损失的功能影响.
  • 遗传冗余可能在减轻伪基因失活效应方面发挥着至关重要的作用.