关于食物传播疾病的基因组观点
David J Lipman1, Joshua L Cherry2,3, Errol Strain1
1Food and Drug Administration, Center for Food Safety and Applied Nutrition, Office of Regulatory Science, College Park, MD 20740.
概括
全基因组测序显示,食物传播病原体的污染事件,如沙门氏菌,往往持续数年,影响多个状态. 幼儿对这些感染的易感性更高.
科学领域:
- 食物传播疾病 食物传播疾病
- 微生物基因组学 微生物基因组学
- 公共卫生监督是对公共卫生的监督.
背景情况:
- 全基因组测序 (WGS) 对于将食物中毒病例与污染源联系起来至关重要.
- 大多数食源性疾病是零星的,并且由于有限的遗传差异化而未被调查.
研究的目的:
- 分析具有最小遗传差异 (SNP) 的细菌病原体分离物 (沙门氏菌,大肠杆菌,坎比洛巴克,李斯特菌) 的集群.
- 为了确定这些集群背后的污染事件的特征.
主要方法:
- 从四种关键细菌病原体的临床分离物中检查了全基因组序列的集群.
- 分析单核酸多态性 (SNP) 差异,以推断污染事件的关系和持续时间.
主要成果:
- 年龄较小的年龄组对沙门氏菌,大肠杆菌和坎比洛巴克菌感染的易感性增加.
- 很大一部分污染事件是长期的,50%的沙门氏菌群持续近三年.
- 所有四种病原体中的大多数病例发生在多个州的集群中,这表明商业食品污染广泛存在.
结论:
- 对SNP集群的WGS分析为食品传播污染事件动态提供了洞察力.
- 研究结果强调了污染事件的长期性质和商业分布的食品的作用.
- 观察到与年龄相关的敏感性模式,对特定的沙门氏菌血清菌种有细微差别.
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